| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2202 |
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| Symbol | |
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| ID | 6116472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2698097 |
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| End bp | 2699752 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633710 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001760579 |
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| Protein GI | 170726553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000401875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAGAAA ACTCAAGCCT TGCCAATACG GCTCAACAGT CAGAGCGACA TGAGCAGCTA
AAGACTTTGC AATCTAGCAG AAACGACCTT GCTAATAGGC AAAAGCCTGA GCTCAGTTTT
TGGCAAATCT TCAATATGTG CTTTGGTTTC CTTGGGATCC AATTTGGCTT TGCCCTTCAA
AATGCTAATG TGAGTCGCAT TTTTCAAACA TTAGGTGCAT CAATCGATGA GATCCCAATT
CTGTGGATCG CAGCACCGCT AACAGGTCTA TTAGTTCAGC CAATTATCGG CTACATGAGT
GACAATACCT GGGGAAAGCT AGGCAGACGT CGGCCCTACT TTCTTATTGG AGCCATATTA
ACCACCCTAG CTATCGTTAT CATGCCACAC TCCCCCACTC TGTGGATTGC CGCTGGCATG
CTGTGGATCA TGGATGCCTC TATCAACATC GCCATGGAGC CCTTCAGAGC CTTTGTTGGA
GATAACCTGC CTAACCGTCA ACGTACTTTA GGCTTTGCCA TGCAGAGTTT TTTTATCGGT
GTCGGCGCAG TCGTTGCTTC CGCACTCCCC TATATACTGA CTAACCTCTT TGATGTGCCC
AATACTGCGC CTGCTGGCGA GATTGCAGCC TCAGTCCGCT ATGCCTTCTA TTTTGGCGGG
GCCGTGCTGC TTATCGCCGT GTTATGGACC GTTGTCTCAA CAAAAGAGTA CTCACCAGAA
GAGCTAAAGG CATTTGAGCA ATACAGTAGT GAAAGTCTCA AAACAGATAA ACCTCATACA
CGTACCGAGC AGCACTATCG CTTTGCATCC ATAATATGGA CTGCAACAGG GCTTATTCTC
ACCCTGATTA TTTGGATACA AGCGCTTGAT AAACAACTGC TGATTTTAAG CTTAGGAGTA
TTCTCTTTTG GTCCACTTCA GCTCTACTGC GCCTTAAAGC TGAAACGACT TAGTCAGCAA
AACAACCAAC TGAACAATCA GCAAGACAAG AAGCAATCAC GTGCTCAACT AGGCATGGTG
TTTAGCCTGG TAGATGATCT ATTCAATATG CCAAAAGCGA TGCACCAACT GGCTCTTGTT
CAGTTCTTCT CTTGGTTTGC TCTATTTTCC ATGTGGATCT ACACCACGGC AGCCGTCACT
GATTATCATT ACGGTACTCA AGATGTACTC TCAAAAGCCT ATAATGACGG CGCTGATTGG
GTAGGTATTT TGTTTGCTTC CTATAATGGT TTCTCAGCAT TAGCCGCCAT CTTAATCCCT
TTTGTAGTGA TGACGTTAGG TTTAAAAAGA GCCCATATGC TCAACCTTTT TTGTGGTGGT
TTTGGCCTAA TAAGCTTCTA TTTTATCGAA GATCCAAACT TGCTTTGGCT TCCAATGATT
GGCGTCGGAA TAGCATGGGC ATCGATACTT TCAATCCCCT ATGCCCTACT GTCAAATATG
CTTCCAGCAG AAAAAATGGG GGTATATATG GGCATTTTTA ACTTCTTTAT TGTGATACCT
CAACTGCTCG CAGCCAGTGT ACTCGGCGTC ATTCTTAATC TCGTATTTGA GGGACAACCT
ATTTTTGCCC TCATTATTGC CGGCAGCTTA ATGATGATCG CTGGAGTCAG TGTCTTGTTT
GTCAAAACAC CTGCCACTGA GGTAACGGCT AAATAA
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| Protein sequence | MSENSSLANT AQQSERHEQL KTLQSSRNDL ANRQKPELSF WQIFNMCFGF LGIQFGFALQ
NANVSRIFQT LGASIDEIPI LWIAAPLTGL LVQPIIGYMS DNTWGKLGRR RPYFLIGAIL
TTLAIVIMPH SPTLWIAAGM LWIMDASINI AMEPFRAFVG DNLPNRQRTL GFAMQSFFIG
VGAVVASALP YILTNLFDVP NTAPAGEIAA SVRYAFYFGG AVLLIAVLWT VVSTKEYSPE
ELKAFEQYSS ESLKTDKPHT RTEQHYRFAS IIWTATGLIL TLIIWIQALD KQLLILSLGV
FSFGPLQLYC ALKLKRLSQQ NNQLNNQQDK KQSRAQLGMV FSLVDDLFNM PKAMHQLALV
QFFSWFALFS MWIYTTAAVT DYHYGTQDVL SKAYNDGADW VGILFASYNG FSALAAILIP
FVVMTLGLKR AHMLNLFCGG FGLISFYFIE DPNLLWLPMI GVGIAWASIL SIPYALLSNM
LPAEKMGVYM GIFNFFIVIP QLLAASVLGV ILNLVFEGQP IFALIIAGSL MMIAGVSVLF
VKTPATEVTA K
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