Gene Swoo_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2198 
Symbol 
ID6116468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2691344 
End bp2693428 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content45% 
IMG OID641633706 
Productelongation factor G 
Protein accessionYP_001760575 
Protein GI170726549 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.86447e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.26448e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATT TATCAAAGTA CAGAAACATT GGTATCTTTG CTCACGTTGA CGCGGGTAAG 
ACCACCACAA CAGAGCGTAT TCTTAAGCTA ACCGGTAAGA TCCATAAGAT AGGTGAAGTT
CATGATGGTG AATCTACAAC TGACTTCATG GAACAGGAAG CTGAGCGTGG TATTACCATT
CAGTCTGCTG CTGTAAGTTG CTTCTGGAAC GACCACCGTT TTAACGTTAT CGACACCCCT
GGCCACGTTG ACTTCACAGT TGAAGTATAC CGTTCTCTTA AAGTTCTTGA TGGCGGCATC
GGTGTATTCT GTGGTAGCGG TGGTGTTGAG CCACAGTCTG AGACTAACTG GCGCTATGCG
AACGAATCAG AAGTTGCTCG TATCATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC
TTCCTACGTG TTGTTAAGCA AACACAAGAT GTACTAGCGG CTAACCCACT AGTTATGGTT
CTTCCAATCG GTATCGAAGA CGAATTTACT GGTGTTGTTG ACCTACTTAC TCGTAAAGCG
TGGGTTTGGG ATGACACTGG TGAAGCTGAA AACTACAAGA TCGAAGATGT CCCAGCTGAC
ATGGTTGAGC TTGTTGAAGA ATATCGTGAA ATGCTAATCG AGTCTGCAGT TGAAATGGAC
GACGACCTAA TGGAATCTTA CATGGAAGGC GAAGAGCCAT CTATGGAAGA CATTAAGCGT
TGTATCCGTG CTGGTACTCG TGACATGACT TTCTTCCCAA CTTACTGTGG TTCTGCTTTC
AAGAACAAAG GTATGCAGCT TCTTCTTGAC GCTGTTGTTG ATTACCTACC AGATCCAGTT
GAAGTTGATC CACAACCTCT TACTGATGAA GAAGGTAACG AAACTGGCGA ATTCGCTCTA
GTTTCTATCG ATGAGCCATT AAAAGCACTA GCATTCAAAA TCATGGATGA CCGTTTTGGT
GCACTAACCT TCGTACGTAT CTACTCAGGT AAGATCAACA AAGGTGACAC CATCCTTAAC
TCGTTCACAG GTAAAACTGA GCGTGTTGGT CGTATGGTTG AGATGCAAGC TGATGAGCGT
AACGAACTTG ATTACGCACA AGCTGGTGAC ATCATCGCTA TCGTTGGTAT GAAGAACGTG
CAAACTGGTC ACACTCTATG TGATGTTAAG CACCCTTGTA CTCTTGAAGC AATGGTATTC
CCAGAGCCAG TTATCTCTAT CGCAGTAGCG CCAAAAGATA AAGGCGGCAG CGAGAAGATG
GGTATCGCTA TCGGTAAGAT GATTGCAGAA GATCCATCAT TCCGCGTTGA GACTGACGAA
GATTCAGGTG AAACTATCCT TAAAGGTATG GGTGAGCTTC ACCTAGACAT TAAGGTAGAT
ATCCTTAAGC GTACTTACGG CGTTGACCTA ATTGTTGGTG AGCCACAAGT AGCTTACCGT
GAAACTATCA CTCAGGTAAC TGAAGATAGC TACACACACA AGAAGCAGTC TGGTGGTTCA
GGTCAGTTCG GTAAGATCGA CTATGTTATC CGTCCTGGTG AGCAAAACTC TGGCTTCACA
TTTAAGTCTT CTGTTGTTGG TGGTAACGTT CCTAAGGAAT TCTGGCCAGC AGTTGAGAAA
GGCTTCGCAA GCATGATGAA CACAGGTACT GTTGCTGGAT TCCCAGTACT TGACGTTGAG
CTTGAGCTTA TGGATGGTGC TTTCCACGCA GTTGACTCGT CAGCTATCGC GTTCGAAATC
GCTGCTAAAG GTGCTTTCCG TCAATCAATG CCAAAAGCCG GTGCACAACT TCTTGAGCCT
ATCATGAACG TTGATGTATT CAGCCCAGAA GACAACGTTG GTGACGTAAT TGGTGACCTT
AACCGTCGTC GCGGTATGAT CAAAGATCAG AACGCTGGTG TTACAGGTGT TCGTATTAAA
GCTGACGTAC CGTTATCAGA AATGTTCGGT TACATCGGTT CACTACGTAC TATGACATCT
GGTCGTGGTC AATTCTCTAT GGAATTTGCT CACTACTCAC CATGTCCAAA CAGTGTTTCT
GAGAAAGTTA TCGCTGAAGT TAAAGAGAGA AACGCTAAGA AGTAA
 
Protein sequence
MTDLSKYRNI GIFAHVDAGK TTTTERILKL TGKIHKIGEV HDGESTTDFM EQEAERGITI 
QSAAVSCFWN DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTQD VLAANPLVMV LPIGIEDEFT GVVDLLTRKA
WVWDDTGEAE NYKIEDVPAD MVELVEEYRE MLIESAVEMD DDLMESYMEG EEPSMEDIKR
CIRAGTRDMT FFPTYCGSAF KNKGMQLLLD AVVDYLPDPV EVDPQPLTDE EGNETGEFAL
VSIDEPLKAL AFKIMDDRFG ALTFVRIYSG KINKGDTILN SFTGKTERVG RMVEMQADER
NELDYAQAGD IIAIVGMKNV QTGHTLCDVK HPCTLEAMVF PEPVISIAVA PKDKGGSEKM
GIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVDL IVGEPQVAYR
ETITQVTEDS YTHKKQSGGS GQFGKIDYVI RPGEQNSGFT FKSSVVGGNV PKEFWPAVEK
GFASMMNTGT VAGFPVLDVE LELMDGAFHA VDSSAIAFEI AAKGAFRQSM PKAGAQLLEP
IMNVDVFSPE DNVGDVIGDL NRRRGMIKDQ NAGVTGVRIK ADVPLSEMFG YIGSLRTMTS
GRGQFSMEFA HYSPCPNSVS EKVIAEVKER NAKK