| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2184 |
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| Symbol | |
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| ID | 6116454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2678204 |
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| End bp | 2679388 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633692 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001760561 |
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| Protein GI | 170726535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000281032 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0116098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGGTT TTGAATTATT TGGTCCTGAA GAGAAGCAAG AAGTTGCAGA TGTAATGGAG
AACGGTTTTA CTTTCCGTTA TAACTTCGAT CATATGCGCA ATGACCGTTG GAAGACACGT
GAGATGGAGC AGCTACTTTG TGAAAAGATG GGCGTAAAAC ATGCTCACCT GCTCTCTAGT
GGTACTGCGG CTCTTCAAAC GGCACTTGCG GCTGCAGGCA TTGGCGCTGG TGATGAAGTT
ATTGTCCCAC CATTTACCTT TGTTGCATCT GTTGAAGCCG TATTTATGGC TGGCGCAGTC
CCTATTTTTG CAGAGATTGA TGAAACTCTA TGTTTGTCTC CTGAGGGCAT TGAAGCTGCC
ATCACACCAC GCACTAAAGC GGTTAACTTA GTTCATATGT GTGGTTCAAT GGGCAAGTTA
GATGAGATTA AAGCCATCTG TGAAAAGCAT GATCTAGTCC TACTTGAAGA TGCTTGTCAG
GCTATTGGTG GTACTTACAA AGGTCAAGCC CTAGGCACTA TCGGTGATGT AGGCTGCTAC
TCATTTGATT CAGTGAAAAC CATTACCTGT GGTGAGGGTG GCGCGGTGAT CACCAACAGC
GAAACCATCT ACAAAAACTC ACACATGTTC TCAGACCACG GTCACGACCA TGTGGGTAAC
GATCGTGGTG CAGAAGGCCA CCCTATTATG GGCTTGAACT TCCGTATCTC TGAGATGAAC
TCGGCGATGG GTCTTGCTCA GCTACGTAAA CTCGATACCA TTATCGATAT CCAACGTAAA
AACAAGAACA CCATCAAGTC AGCCATTGCA GATATCGCCG ATATCTCTTT CCGCGAACTA
CCAGATGTTA AAGGTGACTC AGCAGGCTTC TTGACCTTTA TGATGCCAAC CGAAGAGCGC
ACCATAGAGA TCAACAAAAA GTTAGCTGAA AATGGCGTAG ATGGCTGCTT CTACTGGTAC
GTGAACAACT GGCACTACCT AAGTAACTGG AAGCATATTC AAGAGCTTAA GTCTTGCTCT
GCCCTACCGA TCACATTAAT TGAAGATCGT CCTGATTATA CTCAAGTTTC AGTGCCTAAG
TCTGATGCCA TCATGAGCCG TACTATCTCT ATGCTAATCA AACTGTCATG GACAGAAGAT
GAGATCGCAC AGCGTATTGA AAACATCAAG CGTGCTTTCG CTTAA
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| Protein sequence | MPGFELFGPE EKQEVADVME NGFTFRYNFD HMRNDRWKTR EMEQLLCEKM GVKHAHLLSS
GTAALQTALA AAGIGAGDEV IVPPFTFVAS VEAVFMAGAV PIFAEIDETL CLSPEGIEAA
ITPRTKAVNL VHMCGSMGKL DEIKAICEKH DLVLLEDACQ AIGGTYKGQA LGTIGDVGCY
SFDSVKTITC GEGGAVITNS ETIYKNSHMF SDHGHDHVGN DRGAEGHPIM GLNFRISEMN
SAMGLAQLRK LDTIIDIQRK NKNTIKSAIA DIADISFREL PDVKGDSAGF LTFMMPTEER
TIEINKKLAE NGVDGCFYWY VNNWHYLSNW KHIQELKSCS ALPITLIEDR PDYTQVSVPK
SDAIMSRTIS MLIKLSWTED EIAQRIENIK RAFA
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