Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2178 |
Symbol | |
ID | 6116448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2670346 |
End bp | 2671461 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633686 |
Product | NlpB/DapX family lipoprotein |
Protein accession | YP_001760555 |
Protein GI | 170726529 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000219579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.501785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC AAGTGACTCC TTTAGTCTTG ATCGCTGCAG TTACCGCTTG TAGCTCACCA GTGGATCGAA GACAAGCCAA TGATGGCGAC GAATACATTA ATGCTGTTGT TGAGCCTGCG CTTATTATTC CAGATGGATT AAACACTCCT GTGTACAGTA AGGAGTATGA GATCCCCTCC ATCGGCAGCA AAAGTGATGT GAAATTAGTC GGTAAGATGT TGGATATTCG TCCTCCATTG CAAGTATTAC CTATGGCTGA AGGAACACAT GTTGAAGAGG GCAGTGACAA TATTAAGATT GTTGTTGAGT CTATTGATAA CGATATCGAC CTTAAAAAAG AGCTGTATGA CGTTTTGCAG TCTTATTTAG CGAGTCGCTC TATTGCTGTG TTAAGTGAAG ATTACGATAA TGGCTTGATA GAGACCGATT GGCTGGAAAG CAAAGAGGTG ATCGACTCTA ACCTGTGGGG GAGTGATGAA GTTTACTTGC TTCGTCAACG TTATCAATTT CATGTCGATG TTCGTCCCCA TGGCCGCAGT GGTAATATCT CCATCGATCT AATTGATCAT GAAGAGAGCT TTGATGGTGA GCAGCAAGAT ATCGTGTTAA GTGGTGAAGA TAAGCGTCGT TACACCATAG ACATGCTCAA TAATGCCGTT GCTTACATGA GTGTTAAACG TGCTCAATCT ATTAAAGCTA AGCGCATTAA AGAGAGTTTA GGTATTGATG TTGCTGTGGT TAAAGGTTCT GAGCCTGATG TTGAAGCTGA AGAGTTTGTT CAATCATATT GGCTTGCCGA TGCACCGTTT AAGCGAACCT GGGAACGTCT TCGTATCGTT TTGCCTGAAC TAGGCTTTGA AATTATTGAT ATGGATATTG GTAAAGGTCT TTACTACGTC AATGTCAATG ATGACTCTGG TTTCTGGAGT TCTCTGTGGA ATGAGAAAGA TCTGCCTATT GATGAGGGAT CTTATCGTCT AATTCTCAAA GAGAGCGGTG AGAGCACCGA ACTTTATCTG CACAGTGCAG ATGATCAACC TCTAGATAAT GCGGTTGTTG AAGCTGTGTA TGAAGGTTTA GCTGAGTTGA TGAGAGAGGA CCGTAAGGTT CGATAA
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Protein sequence | MLKQVTPLVL IAAVTACSSP VDRRQANDGD EYINAVVEPA LIIPDGLNTP VYSKEYEIPS IGSKSDVKLV GKMLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNDID LKKELYDVLQ SYLASRSIAV LSEDYDNGLI ETDWLESKEV IDSNLWGSDE VYLLRQRYQF HVDVRPHGRS GNISIDLIDH EESFDGEQQD IVLSGEDKRR YTIDMLNNAV AYMSVKRAQS IKAKRIKESL GIDVAVVKGS EPDVEAEEFV QSYWLADAPF KRTWERLRIV LPELGFEIID MDIGKGLYYV NVNDDSGFWS SLWNEKDLPI DEGSYRLILK ESGESTELYL HSADDQPLDN AVVEAVYEGL AELMREDRKV R
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