| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2169 |
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| Symbol | |
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| ID | 6116439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2662575 |
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| End bp | 2664035 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633678 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001760547 |
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| Protein GI | 170726521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAAT TTACATCAAC AAAATCGCTT TTAGCTGGTG CATTGTCACT CATATTCTGT
GCTACAGCCC CACTCAGCTT CGCCAATAAC GATCTACCAG ATCTGGGCAC CGCAGCAGTT
AATACCTTCA GCTTAGAGAA GGAGACTGTC TTTGGTGATG CCTATATGCG GGTTATTCGC
TCATCGGCTC CCATGTTAAA TGATCCTGTG CTGAGCCAAT ATCTCACGGA GCTGGGCAAT
AAACTCGTGG CGCATGCTAC TGGCGTCAAA ACCCCTTTTT ACTTTTTCCT GCTAAGAAAT
GATGAGATCA ATGCTTTTGC ATTTTTCGGT GGCCACGTTG GTGTCCATAC TGGTTTATTC
CTCAATGCCG ACAATGAGAG CCAGATTGCA TCGGTACTCG GCCACGAAAT AACTCACGTA
ACTCAGCGTC ACTTAGCCCG TTCTTTAGAA GCACAAAACA AGAGCTCAAC CGCCACCATG
GTTGGCATGT TAGGAGCAAT ACTCTTAACC ATCGCCGCAC CTCAAGCGGG AATGGCAGCC
TTAGCAACGA CGCAAGCACT ATCGACTCAA GCAAAAATTA ATTATACCCG TCTTCATGAA
AAAGAAGCCG ATCGCATCGG CATGCAAATT TTGGTTGACG CTGGATTCGA TCCAAATGGC
GCATCAGATT TTTTTGCGAA GTTAGCCACC CGTTACCGCT TTACCTCTAA GCCGCCACAG
ATGTTGCTGA CTCACCCTTT ACCCGAATCG CGAATCACAG ATGCAAGAAA CAGAGCCGCA
CAATATCCAC ACCGATATGT TCCCGATAAT ATCGATTTTC AGCTCGCCAA AGCCAGAATA
CAAGTTCGCT TTTCAAGCTA CAGTGATGAA GCGGCGCTTT CACTCTTTGA AACACAATTA
GCGAAGAAGA CATACGCATT TAAAAACGCC GCACTGTATG GCAAAGCACT TGCTCTGTTT
AAGACCGAAC GCTTTAAAGA GTCTGAAACC ATTATCGATA GTTTGTTAAA AGAGGATAAG
AATAACCTCT TTTATCTAGA TACTAAGACA GATCTTTTAC TACAAAGGGA AGCAAACTCC
GAAGCAATCG CTCTGCTTGA GACACAAAAA CGTCTTAAGC CGACATCTCA AGTGATCAAT
ATCAACTTGG CCAATGCCTA TATTGAGTCC AATCAAGCAG AGAAAGCGAT CCCATTATTA
GAAGATCAGA TATTTCTAGA TAAACAGAAT CAACTCCCCT TCTTCCTACT TAGCGATGCG
TATAAGAAAA CCGGCAACCA AGCGATGGAG CATTTTGTGA AAGCAGAATC TATGGCTCTG
GGCGCTGATT ACAAAGGTGC AGTTGACCAG CTCAATTTTG CTTATCGTCT TACTGAAGAC
AACCCATTGC AACTTGCCCG TATCGAGGCA AGAATAAGAC AGTTTAAACA ATCTGAAAAA
GCACTAGATG AACTAAAATA G
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| Protein sequence | MSKFTSTKSL LAGALSLIFC ATAPLSFANN DLPDLGTAAV NTFSLEKETV FGDAYMRVIR
SSAPMLNDPV LSQYLTELGN KLVAHATGVK TPFYFFLLRN DEINAFAFFG GHVGVHTGLF
LNADNESQIA SVLGHEITHV TQRHLARSLE AQNKSSTATM VGMLGAILLT IAAPQAGMAA
LATTQALSTQ AKINYTRLHE KEADRIGMQI LVDAGFDPNG ASDFFAKLAT RYRFTSKPPQ
MLLTHPLPES RITDARNRAA QYPHRYVPDN IDFQLAKARI QVRFSSYSDE AALSLFETQL
AKKTYAFKNA ALYGKALALF KTERFKESET IIDSLLKEDK NNLFYLDTKT DLLLQREANS
EAIALLETQK RLKPTSQVIN INLANAYIES NQAEKAIPLL EDQIFLDKQN QLPFFLLSDA
YKKTGNQAME HFVKAESMAL GADYKGAVDQ LNFAYRLTED NPLQLARIEA RIRQFKQSEK
ALDELK
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