Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2156 |
Symbol | |
ID | 6116426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2647657 |
End bp | 2649183 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641633666 |
Product | SpoVR family protein |
Protein accession | YP_001760535 |
Protein GI | 170726509 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0915233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACA AGAAAAAAAG AACACCGCTA GACGATGGGC CAGATTGGAC CTTCGATCTT CTTCAAACCT ACTTAACCGA AATTGAAAAA GTAGCGGCTC ATTACAAACT AGACTCCTAT CCTAATCAAA TAGAGGTGAT AACCGCTGAA CAGATGATGG ATGCCTACGC AGGGATAGGT ATGCCAATTG GCTATACCCA CTGGTCATTT GGTAAAAAGT TCATTGAAAC AGAGCAGAGC TATAAGCGTG GTCAAATGGG CCTTGCTTAT GAAATAGTGA TTAATTCAGA TCCCTGTATC GCCTATCTGA TGGAGGAGAA TACCATCACA ATGCAGGCAC TTGTGATGGC TCATGCCAGT TTTGGCCATA ATAGCTTCTT TAAAAATAAC TATCTTTTCA AAACATGGAC AGATGCCAGC TCCATCATTG ACTACCTTGT ATTCGCTAAA AAGTACATCA GTCAATGCGA AGAGGCTCAC GGTGCTGAAA AGGTGGAGCT TATTATCGAC TCCTGTCACG CATTGATGAA TTACGGTGTG GACAGGTACA AACGTCCCAG TGAGATCTCT TTTAAAGAGG AGCAACTAAG ACAGAAAGAC CGTGAAGAGT ATCTACAAAG TCAAGTCAAC GACCTCTGGC GCACTATCCC TTTAAACCAA AGTGATGCAA AAGAGAAACC CAGATCTCAT TTTCCCGAAG AGCCTCAGGA GAATATTCTC TACTTTATTG AGAAGCACGC ACCACTGTTA AAACCTTGGG AGAGAGAGAT TGTTCGAATA GTACGAAAGA TGGGGCAATA TTTCTATCCA CAAAAACAGA CTCAGGTGAT GAACGAAGGC TGGGCAACCT TTTGGCACTA CACCATACTT AACCACCTTT ATGATGATGG TTTAGTCACA GATCGTTTTA TGATGGAGTT TTTGCAGAAC CACACCAATG TGGTCGCACA GCCAAGCTAC AATAGCCCCT ACTATAGCGG CATTAACCCC TATGCCTTAG GTTTTAATAT GTTTGTCGAT ATCAGGCGAA TATGTGAGAA CCCTACAGAG GAGGACAAAC GTTGGTTCCC GGATATTGCA GGCAGTGATT GGCTTGAAAC CCTGCATTTT GCTATGCAGA ACTTTAAAGA TGAGAGCTTT ATCAGCCAAT ACCTATCACC AAATATTATT CGCCAATTTA AACTCTTTGG TGTACTAGAT GATGATAAGA AAAACTACCT GTCTGTATCG GCTATTCATG ATGATCAAGG CTATAAAGAT ATACGTCAAA TGCTATCGCA GCAGTATAAC CTGTCCAACT TAGAGCCTAA CATTCAAGTG CAGAGTGTTG AAGTGAAAGG AGATAGGTCC CTAACCTTAA GGTATATTCC AACAAATCGC GTACCTCTGG CAAAAAGCCG CCATGAAGTT GTAAAGCATC TGCATCGGCT CTGGGGCTTT GACGTGAGGT TAGAGGAGTT AAATCTAGAC GGTGAGCGTA CAGTAATAGC CGCCTGCCCC GATCAGGAAG ATGAAGAGGA ATCTTAA
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Protein sequence | MDNKKKRTPL DDGPDWTFDL LQTYLTEIEK VAAHYKLDSY PNQIEVITAE QMMDAYAGIG MPIGYTHWSF GKKFIETEQS YKRGQMGLAY EIVINSDPCI AYLMEENTIT MQALVMAHAS FGHNSFFKNN YLFKTWTDAS SIIDYLVFAK KYISQCEEAH GAEKVELIID SCHALMNYGV DRYKRPSEIS FKEEQLRQKD REEYLQSQVN DLWRTIPLNQ SDAKEKPRSH FPEEPQENIL YFIEKHAPLL KPWEREIVRI VRKMGQYFYP QKQTQVMNEG WATFWHYTIL NHLYDDGLVT DRFMMEFLQN HTNVVAQPSY NSPYYSGINP YALGFNMFVD IRRICENPTE EDKRWFPDIA GSDWLETLHF AMQNFKDESF ISQYLSPNII RQFKLFGVLD DDKKNYLSVS AIHDDQGYKD IRQMLSQQYN LSNLEPNIQV QSVEVKGDRS LTLRYIPTNR VPLAKSRHEV VKHLHRLWGF DVRLEELNLD GERTVIAACP DQEDEEES
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