Gene Swoo_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2149 
Symbol 
ID6116412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2636079 
End bp2637710 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content43% 
IMG OID641633652 
ProductATP-dependent protease 
Protein accessionYP_001760528 
Protein GI170726502 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.59451e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAA ACGCCATACC TGTTTCAGCG CTGTCTCCGC AATACAAGCT CCCAACCATC 
TCTGAGCTTA CACATAGCAA TCAAACTTTA CTGCTGGGTC AAGAGAGAGT ATCAAACGCA
TTCGAGCTGC TAACGATGAC AGCACATCAA CATATGTACC TAGCTGACTA TGCAGGCGTT
GATAGACTTG AATTCATTAA AAGCCTTGTT GGTATTCAAG AGAAACAAAG TTACCAATAC
CTTTCTGGTA ATATAAAACG CTCAGATCTG TTAGGTCAAT TTAACGAACG TGAACAGAAC
TCAATGGCTG AAAACCCAAT ACCAGGTGCA CTTGCCAATA ATCACTACCT GTTTATTTGT
GCGGAATCAT TATGGAAAAG AGAGGGACTT TGGGATCTGC TTTTAGATAT CTTATCTAAA
CGAGAGTATA AAGTTCACTC ATCACTTGCA GCCACTCCCC TTGACTGTAA AGTCATTCTC
GTTGGAAGCA GTATGCAGTA CAGCGTCAAT TGGGTTGAAG AGAGCAGATT CCCGCACCTG
TTTCCAATTT TAGGTGAGAT GGTCAATGAG CTCGACCTAA ATCACTCATC AGAGTCTGAA
TATGCAACCT GGCTAAAAGC AGTTGCAGCC ACAGTTGATG CAGAACTTGA GCAATCTGCC
CTCGCCCCAC TGTTTCAATA CTGTGCGCGA CTTGCCGATC ATCAACAAAG GTTCTCATTG
CTGTCGGCTC AAATAGGGCA AATGCTTGCA CAAGCTAAGG CATACGGCCA CTCAAAACTA
ATCTCAGCTC AGAGTTTCCA ATACGCATTA AAACAGTACC AGCAGCGTCA CAACGCCTCA
GAAATGCTAT CAGCTCAAAA CTTCGATGAT AAGTTTATTA GCCTGCCAAC TGATGACTAT
ATGGTAGGGC AAATTAACGG CTTAACAGTA TTAGATACGG TTGAGTATTG CTACGGTGAA
CCTGCCAGAA TCACAGCTTC TGTCCACTAT GGTGACGGTG AAGTCGCCGA TATTGAGCGA
AAGTCAGAGC TGGCAGGTAA TATTCATGCT AAAGGCATGA TGATACTATC TTCATGTCTT
TACCGCATTT TTGGTAAAGA CGCCCCACTC CACCTCAATG CCAACATTGT GTTTGAACAA
TCCTATCAAG AGATAGACGG TGACAGTGCC TCATTAGCAG AGTATTGCAG TTTAATCTCT
GCCATCACAG AGAAGCCTAT TGACCAAGGT ATTGCCGTTA CTGGAGCACT AGATCAATTC
GGTCATGTTC AGGCTATTGG TGGCGTTAAT GAGAAGATTG AAGGCTTTTA TAATCTGTGT
GAACGCCGCG GTTTAACAGG AAGACAAGGC GTCATTATTC CGAGCTCAAA CACACAACAA
CTTAATCTCA ATCACAATAT TATCGAAGCG ATAAAGGCAG GTAAATTTCA TCTTTATGGT
ATTGAGCATA TTGATGAAGC GGTTGAGTTA TTAATGAACA TGAAGGCCGG TGTACCTGAC
GAGAGTAATA ACTTTCCTGA CGACTCTCTT TACGGTCTAG TACAAGATAG ATTGGCTCGT
TTGGCTGGCT ATCAAGAAGA GGAGAGTGGA TTTTTCGCCA AACTCCTCGA AAAAATGAAA
TTTTCCAGCT GA
 
Protein sequence
MNSNAIPVSA LSPQYKLPTI SELTHSNQTL LLGQERVSNA FELLTMTAHQ HMYLADYAGV 
DRLEFIKSLV GIQEKQSYQY LSGNIKRSDL LGQFNEREQN SMAENPIPGA LANNHYLFIC
AESLWKREGL WDLLLDILSK REYKVHSSLA ATPLDCKVIL VGSSMQYSVN WVEESRFPHL
FPILGEMVNE LDLNHSSESE YATWLKAVAA TVDAELEQSA LAPLFQYCAR LADHQQRFSL
LSAQIGQMLA QAKAYGHSKL ISAQSFQYAL KQYQQRHNAS EMLSAQNFDD KFISLPTDDY
MVGQINGLTV LDTVEYCYGE PARITASVHY GDGEVADIER KSELAGNIHA KGMMILSSCL
YRIFGKDAPL HLNANIVFEQ SYQEIDGDSA SLAEYCSLIS AITEKPIDQG IAVTGALDQF
GHVQAIGGVN EKIEGFYNLC ERRGLTGRQG VIIPSSNTQQ LNLNHNIIEA IKAGKFHLYG
IEHIDEAVEL LMNMKAGVPD ESNNFPDDSL YGLVQDRLAR LAGYQEEESG FFAKLLEKMK
FSS