| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2149 |
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| Symbol | |
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| ID | 6116412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2636079 |
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| End bp | 2637710 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633652 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_001760528 |
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| Protein GI | 170726502 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000159451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA ACGCCATACC TGTTTCAGCG CTGTCTCCGC AATACAAGCT CCCAACCATC
TCTGAGCTTA CACATAGCAA TCAAACTTTA CTGCTGGGTC AAGAGAGAGT ATCAAACGCA
TTCGAGCTGC TAACGATGAC AGCACATCAA CATATGTACC TAGCTGACTA TGCAGGCGTT
GATAGACTTG AATTCATTAA AAGCCTTGTT GGTATTCAAG AGAAACAAAG TTACCAATAC
CTTTCTGGTA ATATAAAACG CTCAGATCTG TTAGGTCAAT TTAACGAACG TGAACAGAAC
TCAATGGCTG AAAACCCAAT ACCAGGTGCA CTTGCCAATA ATCACTACCT GTTTATTTGT
GCGGAATCAT TATGGAAAAG AGAGGGACTT TGGGATCTGC TTTTAGATAT CTTATCTAAA
CGAGAGTATA AAGTTCACTC ATCACTTGCA GCCACTCCCC TTGACTGTAA AGTCATTCTC
GTTGGAAGCA GTATGCAGTA CAGCGTCAAT TGGGTTGAAG AGAGCAGATT CCCGCACCTG
TTTCCAATTT TAGGTGAGAT GGTCAATGAG CTCGACCTAA ATCACTCATC AGAGTCTGAA
TATGCAACCT GGCTAAAAGC AGTTGCAGCC ACAGTTGATG CAGAACTTGA GCAATCTGCC
CTCGCCCCAC TGTTTCAATA CTGTGCGCGA CTTGCCGATC ATCAACAAAG GTTCTCATTG
CTGTCGGCTC AAATAGGGCA AATGCTTGCA CAAGCTAAGG CATACGGCCA CTCAAAACTA
ATCTCAGCTC AGAGTTTCCA ATACGCATTA AAACAGTACC AGCAGCGTCA CAACGCCTCA
GAAATGCTAT CAGCTCAAAA CTTCGATGAT AAGTTTATTA GCCTGCCAAC TGATGACTAT
ATGGTAGGGC AAATTAACGG CTTAACAGTA TTAGATACGG TTGAGTATTG CTACGGTGAA
CCTGCCAGAA TCACAGCTTC TGTCCACTAT GGTGACGGTG AAGTCGCCGA TATTGAGCGA
AAGTCAGAGC TGGCAGGTAA TATTCATGCT AAAGGCATGA TGATACTATC TTCATGTCTT
TACCGCATTT TTGGTAAAGA CGCCCCACTC CACCTCAATG CCAACATTGT GTTTGAACAA
TCCTATCAAG AGATAGACGG TGACAGTGCC TCATTAGCAG AGTATTGCAG TTTAATCTCT
GCCATCACAG AGAAGCCTAT TGACCAAGGT ATTGCCGTTA CTGGAGCACT AGATCAATTC
GGTCATGTTC AGGCTATTGG TGGCGTTAAT GAGAAGATTG AAGGCTTTTA TAATCTGTGT
GAACGCCGCG GTTTAACAGG AAGACAAGGC GTCATTATTC CGAGCTCAAA CACACAACAA
CTTAATCTCA ATCACAATAT TATCGAAGCG ATAAAGGCAG GTAAATTTCA TCTTTATGGT
ATTGAGCATA TTGATGAAGC GGTTGAGTTA TTAATGAACA TGAAGGCCGG TGTACCTGAC
GAGAGTAATA ACTTTCCTGA CGACTCTCTT TACGGTCTAG TACAAGATAG ATTGGCTCGT
TTGGCTGGCT ATCAAGAAGA GGAGAGTGGA TTTTTCGCCA AACTCCTCGA AAAAATGAAA
TTTTCCAGCT GA
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| Protein sequence | MNSNAIPVSA LSPQYKLPTI SELTHSNQTL LLGQERVSNA FELLTMTAHQ HMYLADYAGV
DRLEFIKSLV GIQEKQSYQY LSGNIKRSDL LGQFNEREQN SMAENPIPGA LANNHYLFIC
AESLWKREGL WDLLLDILSK REYKVHSSLA ATPLDCKVIL VGSSMQYSVN WVEESRFPHL
FPILGEMVNE LDLNHSSESE YATWLKAVAA TVDAELEQSA LAPLFQYCAR LADHQQRFSL
LSAQIGQMLA QAKAYGHSKL ISAQSFQYAL KQYQQRHNAS EMLSAQNFDD KFISLPTDDY
MVGQINGLTV LDTVEYCYGE PARITASVHY GDGEVADIER KSELAGNIHA KGMMILSSCL
YRIFGKDAPL HLNANIVFEQ SYQEIDGDSA SLAEYCSLIS AITEKPIDQG IAVTGALDQF
GHVQAIGGVN EKIEGFYNLC ERRGLTGRQG VIIPSSNTQQ LNLNHNIIEA IKAGKFHLYG
IEHIDEAVEL LMNMKAGVPD ESNNFPDDSL YGLVQDRLAR LAGYQEEESG FFAKLLEKMK
FSS
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