Gene Swoo_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2148 
Symbol 
ID6116411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2635495 
End bp2636010 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID641633651 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_001760527 
Protein GI170726501 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.47398e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG CAAACAGTTT CAATAAAGAA GACCTCATCG CCTGTGGCCA TGGTGAACTA 
TTTGGAGAGC ACTCTCCTCG CCTCCCTATA GATAATATGT TGATGATAGA TCGTATCACT
AAGATTAATG CTGATGGCGG AGAGTTTGGT AAAGGTGAAA TTGTAGCTGA ACTCGATATA
AACCCCGAGC TATGGTTTTT TAAATGTCAC TTCGATGGGG ATCCGGTTAT GCCTGGTTGC
CTTGGCTTAG ACGCATTGTG GCAACTTGTT GGCTTCTTCT TAGGTTGGGA AGGTGCTGAA
GGTAAAGGAC GAGCGCTGGG AGTTGGAGAG GTTAAGTTTA CGGGTCAAGT ACTACCTGAT
GCCAAAAAAG TGACTTACAA ACTTACCGTT AAGCGCAAAG TCTACCGTAA ATTAGTCATG
GGTATTGCCG ATGCCGTCAT GGAAGTCGAT GGTCGAGAGA TATACAGTGC AACCGATCTT
AAGGTGGGAA TATTTAAAGA TACATCCAGT TTTTAA
 
Protein sequence
MSKANSFNKE DLIACGHGEL FGEHSPRLPI DNMLMIDRIT KINADGGEFG KGEIVAELDI 
NPELWFFKCH FDGDPVMPGC LGLDALWQLV GFFLGWEGAE GKGRALGVGE VKFTGQVLPD
AKKVTYKLTV KRKVYRKLVM GIADAVMEVD GREIYSATDL KVGIFKDTSS F