| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2133 |
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| Symbol | |
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| ID | 6116396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2609419 |
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| End bp | 2611491 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633636 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_001760512 |
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| Protein GI | 170726486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000755516 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0766103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA TACCCTTGGT TGTTTCAATC GCCAGTATTT TTGTAGGATT CTCGGCGTGG
GCGTTAACCC CATCAATTCC ATTCAGCGAG TTACCCGCTT TAACACAGGA GCCGCAACAT
AAAGTTGCAA GCAAACGTGT TACAGGTCTC TTCACTCGTT CCCATTACCA TAGATTCGAT
CTTGACGACA CTTTCTCTGA GCAGGTGTTT AAACGTTACC TTAAGCAGTT AGATTATCGC
CGTAACGTGA TGCTGCAGAG TGATCTCGAT AGTTTTGGCT TATATTCAAA GCAGTTCGAT
GACATGTTAA AGAGTGGAGA TCTGACCCCT GCCTATAAGA TGTTTGATCT GGTGCAGAAG
CGTCGCTATG AGCGTTTTGC TTACGCCTTG TCTCTTCTCG ATAAAGAGAT CGATTTTACC
GTCCCTAATG ATAAATATCA GTATGATCGC GAAGATGCCG CATGGCCGAA AGATGAAGCT
GAGATTAATG AGTTATGGCG TCAGCGTGTT AAATATGACG CGTTGAACCT GAAACTGACG
GGTAAAACAT GGGAAGAGAT CGTTCCTGTC CTTGAGAAGC GCTATAACAA TGCTATCAAG
CGACTGAGCC AGACAAAAAG TGAAGATGTT TTCCAAGGTG TGATGAATGC TTTTTCTCGC
ACGGTAGAAC CTCACACAAG TTACCTTTCT CCACGTAATG CTGAACGTTT CCAGATGGAG
ATGAACCTAA GCCTTGAAGG CATAGGTGCT GTGTTACAGA TGGATGATGA CTATACAGTG
ATCAAAAGCC TTGTTGCCGG CGGACCTGCT GCAACTAGTG AGAAGCTTTC TCCTGAAGAT
AAAATTGTTG GTGTTGGTCA AGATGGCAAA GAGATTGTCG ATGTCATTGG CTGGCGTCTT
GATGATGTAG TTGAATTGAT TAAAGGGCCT AAAGGCAGCA AAGTTGTGCT GCAAATTCTA
CCTAAGAAGG GCGGTTCTTC AGCTAAGCCA TTTGAAGTCG TTATCGTCAG AGACAAAATC
AGATTAGAAG ATCGCGCCGC AACATCTGAG GTGATTGAGC CTGAAGAGGG CATGTACGCT
AATCGTAAGG TCGGTGTTAT TCAGATCCCG GGTTTCTACA TGGATCTCTC TAAAGATGTT
TCTAAAGAGC TTGTTAAGCT AAAAGAAGCG CAAGTTGAAG GTATTATCAT TGACCTGAGA
GGTAACGGTG GTGGTGCGTT AACTGAAGCA ACCCTATTAA CTGGGCTGTT TATTGAGCAG
GGACCTGTGG TTCAAATCAG AGATGCCAAC GGCAAAGTGT CTCAGAATCG TGATAATGAC
GGCAAAGTCA CCTACTCAGG TCCATTGAGC GTGATGGTTG ACCGCTATAG CGCGTCGGCA
TCAGAAATTT TTGCTGCAGC ACTTCAGGAT TATGATAGAG CCTTGATTGT CGGTGAATCT
ACATTTGGTA AAGGCACGGT GCAGCAGCAC AAGAGTCTTG GTCGAATTTA TGATATGTAT
GAAAAGCCGA TTGGCCATGT TCAGTACACG ATCGCGAAAT TTTACCGAAT CAATGGTGGC
AGCACTCAGC TTAAAGGTGT GACTCCTGAT ATCTCTTTCC CTAGCGCATT AGAGCCTGGT
GAATATGGAG AAGCGGAAGA GGAGAATGCA TTGCCTTGGG ATAAGGTGCC TGTTGCTCAG
TACGGCACTT TGGGTGATAT AAACCCAAAT TTAATCTCTA ACTTGGATGT TAAGCATCAA
ACTCGTATCG GCAAAGATGT CGAGTTTGGC TATATCTATC AAGATATTGC TGAGTTTAAA
AAGCACCACG ATGAGAAAAC AGTTTCTTTG GTAGAAAGTG AGCGGATCAG TGAGCGTGAA
GCTAACGACA AAAAGCAATT GGATCGTTTA AATGAGCGCC GTGTTAGCCA AGGTTTGGCC
ATGGTTAAAA GTTTAGACGG TGATGATGAG ACGGAAACTG ACTCAGAAAC AGAGGAAGAG
GTCGAAACAC CAGATGCATT CCTTGATGAG ACCGTTTACA TCACTTTAGA CTTAGTTGAT
ATCGAGCGAG TAGCGAAAAA CCAAGTTAAA TAG
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| Protein sequence | MRKIPLVVSI ASIFVGFSAW ALTPSIPFSE LPALTQEPQH KVASKRVTGL FTRSHYHRFD
LDDTFSEQVF KRYLKQLDYR RNVMLQSDLD SFGLYSKQFD DMLKSGDLTP AYKMFDLVQK
RRYERFAYAL SLLDKEIDFT VPNDKYQYDR EDAAWPKDEA EINELWRQRV KYDALNLKLT
GKTWEEIVPV LEKRYNNAIK RLSQTKSEDV FQGVMNAFSR TVEPHTSYLS PRNAERFQME
MNLSLEGIGA VLQMDDDYTV IKSLVAGGPA ATSEKLSPED KIVGVGQDGK EIVDVIGWRL
DDVVELIKGP KGSKVVLQIL PKKGGSSAKP FEVVIVRDKI RLEDRAATSE VIEPEEGMYA
NRKVGVIQIP GFYMDLSKDV SKELVKLKEA QVEGIIIDLR GNGGGALTEA TLLTGLFIEQ
GPVVQIRDAN GKVSQNRDND GKVTYSGPLS VMVDRYSASA SEIFAAALQD YDRALIVGES
TFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IAKFYRINGG STQLKGVTPD ISFPSALEPG
EYGEAEEENA LPWDKVPVAQ YGTLGDINPN LISNLDVKHQ TRIGKDVEFG YIYQDIAEFK
KHHDEKTVSL VESERISERE ANDKKQLDRL NERRVSQGLA MVKSLDGDDE TETDSETEEE
VETPDAFLDE TVYITLDLVD IERVAKNQVK
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