| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2099 |
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| Symbol | |
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| ID | 6116362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2573011 |
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| End bp | 2573985 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641633602 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760478 |
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| Protein GI | 170726452 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000451168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.223668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAGCAT TTGATTTTGA TTTGAAAAGT TTGCAGGTGT TTGTCATTGC GGCCCAAACT
GGCAGCATGA CAGAAACTGC CAGACGTTTA GGCTTGACCC AATCTTCGGT ATCCCAGACC
TTGTCTATGT TAGAAAAAAA CCTCAAGGTG GAGTTGCTCG ATCGCACTGT TCGGCCACTT
GGGCTGACCA TTGCAGGGCG CTATTTTTTT GATCAATCCA GTCATCTTCT TTCCCAAGCT
GAGCAGACTC AAAAGGTGTT TAGCCAAGGG GCTTTTGAGC AACTTCACTT AGTGCGTATC
GCTATGGTTG ACTCCTTGGC AACTTCGTTA GGCAAGCCCT TGATTGAAGC TGTGAAAAAG
CGAACAGAGA ACTGGACATT GTCCACTGGC CGCTCCCACA TGCATGCCGA TGCGTTAATG
TCTCGCCAAG TCGATATTAT TATCTCTGAT GATGCACTTG AAGACAGTGA TGAGCTCAGC
CGCTACCCAA TATTGAGTGA GCCTTTTGTT TTAGTCAGCC CCTTGAATGT GGGTTGGGAG
CATAAAGAGG GGAGTTTAGT AAGCGATATT CACCGTTTAC ATCAAGAGTT GGATTTTGTT
CGCTATACCC ACGATTCCTT AATCGGTACC AGTATCGAGC GATACCTAAG ACGTCTTGGC
ATTAAACCAG CAATGAGATT ACAGTTGGAT AATACCTTTG CTGTACTGTC TATGGTGGCA
TCTGGTCTGG GCTGGACCAT CACGACCCCT TTGTGTTTGT ACCAAAGTGG TATCCCTTTG
GCGCAAGTCA AGTGCCAGCC ACTCCCTGCC AATTATGGTT TTAAGCGACG TTTAACCTTA
GTCACTCGTC GCCATGAACT GAGCGATCTG GCAGAGCAGA TGGCCAGAGA CAGTTGTGAG
ATCATGTCCG AGTGTTTTCT ACCTGAACTT GAAAAAGATC TTCCCTGGCT AGTGGCAGAT
ATCGATATAG GTTAA
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| Protein sequence | MRAFDFDLKS LQVFVIAAQT GSMTETARRL GLTQSSVSQT LSMLEKNLKV ELLDRTVRPL
GLTIAGRYFF DQSSHLLSQA EQTQKVFSQG AFEQLHLVRI AMVDSLATSL GKPLIEAVKK
RTENWTLSTG RSHMHADALM SRQVDIIISD DALEDSDELS RYPILSEPFV LVSPLNVGWE
HKEGSLVSDI HRLHQELDFV RYTHDSLIGT SIERYLRRLG IKPAMRLQLD NTFAVLSMVA
SGLGWTITTP LCLYQSGIPL AQVKCQPLPA NYGFKRRLTL VTRRHELSDL AEQMARDSCE
IMSECFLPEL EKDLPWLVAD IDIG
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