| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2098 |
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| Symbol | |
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| ID | 6116361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2571266 |
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| End bp | 2572567 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641633601 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001760477 |
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| Protein GI | 170726451 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000978799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.232961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CAGGGCCAAG AATTGTTATC ATTGGCGGTG GCGCCGGAGG ATTAGAGCTA
GCCACTCAGC TAGGACACAA GCTGGGGAGA AAAAACCGTG CTCAGATTAT CCTTGTCGAT
AAAAATCGTA CCCACATATG GAAACCCCTG CTTCATGAGG TCGCCACTGG CTCACTGGAT
TCCGATCTCG ATGGCGTTGT CTACTCTGCT CATGCTGCAA AACATGGCTA CCAATTTCAG
CTTGGAACTT TCTGTGGACT CAATGCTGAA ACGAAGCAGA TCACCATGGC TCCTATTGCC
GATGATGCTG GTCATACTAT CTTGCCTGAA CGTCAGATCT CATACGATAA ATTAGTGATA
GCTATCGGCA GTGTCAGCAA TGATTTCAAC ACCCCAGGCG TAAAAGAGAA CTGCTTCTTC
CTCGACTCCC ACCAGCAGGC AAATCGTTTT CACGATGCCC TACTGGACTG CTTTACCCGA
GTCCACCAGT CAGAATCTAT TAACCAGCTC AACATCGCCA TCGTTGGCGG CGGTGCAACA
GGAGTTGAGC TTTCAGCAGA GCTTTACCAT GTCACCGAGA TGTTGAAAAT CTATGGCTTA
AGCAAGATGA CAGCTGAAAA ACTCAATATC CACCTTATTG AAGCTGGCCC TCGTATTCTC
CCTGCACTGC CTGAGCGTAT TGCAGGCTCT GCCAGACGTG AGTTGACTAA GCTGGGTGTC
AATGTGATGG AAAACACCCG CATCAGCGAA GCCACAGCTC AAGGGTTTGT CACCTCTGAA
GGAGAGGTGA TTGAAGCCAA CTTGATGCTA TGGGCCGCAG GAGTGAAAGC GCCAGACTTT
ATCAAGTCGA TTGAACTGTT TGAGCTAAAC CGCGCCAATC AGATCATGGT CAAACCTAGC
CTACTTAGCA CTGTCGATGA GGCTATCTAT GTGATCGGGG ATTGTTGTGC TTGCCAACAA
GCCGATGGCA GCTTTGTTCC ACCACGTGCA CAGTCGGCGC ACCAAATGGC TGAATGTGTA
GAGAAAAACA TTATTAACGA GCTCAACGGT GAACCAAGAG AAGCTTACAC CTATGTGGAT
CATGGTTCAC TGGTTAATCT CTCACGTTTC AGTACTGTGG GCAGCTTGAT GGGTAACTTG
ACTAAGAACA GCATGTTCAT TGAGGGCAGA ATTGCTCGTC TAGTTTATAT CTCTTTGTAC
CGCATGCACC AAAGAGCCAT ACACGGCAGC GTTAAAACCC TCGGACTCTG GTTTGCCGAG
AAAGTAATGC GCGTTGTCAG ACCGAGAATG AAGCTGCACT AA
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| Protein sequence | MNAAGPRIVI IGGGAGGLEL ATQLGHKLGR KNRAQIILVD KNRTHIWKPL LHEVATGSLD
SDLDGVVYSA HAAKHGYQFQ LGTFCGLNAE TKQITMAPIA DDAGHTILPE RQISYDKLVI
AIGSVSNDFN TPGVKENCFF LDSHQQANRF HDALLDCFTR VHQSESINQL NIAIVGGGAT
GVELSAELYH VTEMLKIYGL SKMTAEKLNI HLIEAGPRIL PALPERIAGS ARRELTKLGV
NVMENTRISE ATAQGFVTSE GEVIEANLML WAAGVKAPDF IKSIELFELN RANQIMVKPS
LLSTVDEAIY VIGDCCACQQ ADGSFVPPRA QSAHQMAECV EKNIINELNG EPREAYTYVD
HGSLVNLSRF STVGSLMGNL TKNSMFIEGR IARLVYISLY RMHQRAIHGS VKTLGLWFAE
KVMRVVRPRM KLH
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