| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2097 |
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| Symbol | |
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| ID | 6116360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2569252 |
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| End bp | 2571186 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633600 |
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| Product | helicase c2 |
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| Protein accession | YP_001760476 |
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| Protein GI | 170726450 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0479006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.269462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCCC TAACGCAAAA ATTAACCAAA GCGACTCTGG ATGCATTTAG TGCCGATGGA
GCTCTAGCGA GCCATGTTCA AGGCTATAGT GCTCGTGAGG TACAGATTTC GATGGCGTCT
GCTGTGTGTG AAGCGATAGC TGAGCAGCAC AATTTAGTGG TGGAAGCGGG CACTGGTGTG
GGCAAAACTT TCGCTTACCT TATTCCTGCG CTACTTAGTG GTCAGCAGAT CATCGTCAGT
ACTGGCAGTA AAAACCTTCA AGAGCAGCTA TTTTATAAAG ATCTTCCTAC ACTTCTTTCA
TTGCTGAAAT TGACCCCTAA GGTGGCGTTG CTCAAAGGGC GCAACAACTA TTTGTGCCAA
GAGCTATTAG AGAAACAGCT GCAGGCCTGT GATTCTCTAG ACACGAAAGT ACTTGATGAT
CTACTTAGAA TTAATCAGTG GGCGGGGCAA ACCAGTGATG GGGATTTAGG TGGGCTGACA
TCTGTGTCAG AGACCTCCGA TGCGCTGCCC TTAATTGCCA GCCGGCGCGA GGTTTGCTCC
GGTAAAAAGT GTGCTCACTA TGAGGTGTGT TATACCCGAA AAGCGCGCAG TAAAGCGATG
GATGCCAAGG TGATTGTGGT CAACCACCAC CTTTTCTTTG CTGACAGGGT ATTAAAAGAG
ACTGGATTTG CCGAGTTATT ACCAGAGTCG GATGTGGTGA TTTTCGATGA GGCACATCTG
CTACCAGATA TTGCTGTGAC CTATTTCGGT CAGCAACTCT CCACCCGCAG CTTCAGTGAG
CTGCTCAATG AGATTATCAA TATCTACCGC AATGAGCTTA GGGATTCTGC CCAGATAGAG
ACACTGACCT CTCGCTGTAT TCGTTTTTTT AATGATTGGC ATCAACAGCT GTTTGAATAT
GATGAAACTG ACTGGCGACG CTTGATGGGA GAGCAGCAGA TTGCTGCTTC CTCTTGGGAG
TTAATCGCTG AATTTAAGGC TTTGGAAAAC CTGCTTATTG GGCATCTTGG GCGCAGTGAT
GATCTGGACA GCGCGGTTGA AAAGCTTAAT GGTTATATTC ACAAACTGAA TCAATTTTTG
CTTTGTGACA ATGAACAAGC GGCATACAAC ATAGATTATG GCCATCGCTA TTTGACATTA
AGAATCGCGC CAATTCATGT TTCCCGTGAG TGCGAGCAGT TATTTGACCC TAAAACGGCG
TGGATATTTA CCTCTGCAAC CTTACAGATC AATCGTGATT TAAGTTTATT TACTAAAGAT
TTAGGCATAG ACAGTGCGAA AAAGATGATC TTAGACAGTC CCTTTGATTA TTTTAATAAT
GCACTTTTAT GTGTGCCTCG CCATCTTTCG CGGGTCAGTT ATCATGATGC TGCGGTCAGG
GATCTCGTCG CGGTAGCAAC CAAAGCGATT AATGCGGCTC AAGGGCGGAC ATTTATTCTC
TTTACCAGTC ATAGAATGAT GAACGCGGTC GCGACAGTAC TGAGCAGTAG GGTGCAATAT
CCATTATTGG TACAGGGTCA GGCTGGTAAG CAGAGTCTGC TGAAGAAGTT TCGTCAATTA
GGTAACGCGG TACTGCTTGG TACTGGTGCA TTTTGGGAGG GGGTTGATAT GCGTGGCAGA
TTGTTAAGCT GCGTGATTAT CGACAAACTG CCATTTGTGT CACCGGATGA TAGCTTATAC
CGTGCGCGCG CCGACAGTAT CTCCCGTGAT GGCAAAGACC CCTTTGCCAC ACTCTCTTTG
CCACAAGCGG TGATCTCACT TAATCAAGGG GTTGGCCGTT TAATTCGAGA TGAAAAGGAT
AAGGGAGTAT TAATCTTGTG TGATAACCGC ATTGTTAATC GCCCCTACGG ACAGGCATTT
CTTAACTCAC TTCCACCGAT GAAACGTACT CGGGATATGG ACCAGGTTGT CAATTTTTTA
GAAAAGATAA AATAA
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| Protein sequence | MKALTQKLTK ATLDAFSADG ALASHVQGYS AREVQISMAS AVCEAIAEQH NLVVEAGTGV
GKTFAYLIPA LLSGQQIIVS TGSKNLQEQL FYKDLPTLLS LLKLTPKVAL LKGRNNYLCQ
ELLEKQLQAC DSLDTKVLDD LLRINQWAGQ TSDGDLGGLT SVSETSDALP LIASRREVCS
GKKCAHYEVC YTRKARSKAM DAKVIVVNHH LFFADRVLKE TGFAELLPES DVVIFDEAHL
LPDIAVTYFG QQLSTRSFSE LLNEIINIYR NELRDSAQIE TLTSRCIRFF NDWHQQLFEY
DETDWRRLMG EQQIAASSWE LIAEFKALEN LLIGHLGRSD DLDSAVEKLN GYIHKLNQFL
LCDNEQAAYN IDYGHRYLTL RIAPIHVSRE CEQLFDPKTA WIFTSATLQI NRDLSLFTKD
LGIDSAKKMI LDSPFDYFNN ALLCVPRHLS RVSYHDAAVR DLVAVATKAI NAAQGRTFIL
FTSHRMMNAV ATVLSSRVQY PLLVQGQAGK QSLLKKFRQL GNAVLLGTGA FWEGVDMRGR
LLSCVIIDKL PFVSPDDSLY RARADSISRD GKDPFATLSL PQAVISLNQG VGRLIRDEKD
KGVLILCDNR IVNRPYGQAF LNSLPPMKRT RDMDQVVNFL EKIK
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