Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2074 |
Symbol | |
ID | 6116337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2543275 |
End bp | 2544927 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633577 |
Product | hypothetical protein |
Protein accession | YP_001760453 |
Protein GI | 170726427 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0955309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG ATCAACAAGT TGATGCAGAT GTTAAGCAAG TAAGAGGCAT TTCTGCTATC TGGTTTGTGC CCATCGTTGC CTTGCTCATT GGTGGTTGGA TGGTCTATTA CCACTGGAGT AATCAAGGCC CTGTAGTGAC GCTCTTTTTT GAGTCTGCTG AGGGGATGGA AGCGGGTAAA ACCAAGATTA AGTCTCGGCA TGTGAATATC GGTGAAGTGG AAAGTATTAC CCTTAATGAT GCTGGCGATG GGGTGACGGT GACTGCAAGG CTTGCTAAAA ACAGTGAGAA GATGCTGGTA GAGGACAGCA ACTTCTGGAT TGTGACACCC AAAATATCCC TTTCAGGGGT TTCAGGTTTA GATACATTGA TTTCGGGCGT ATATATTGAG ATTGCACCAG GGAAATCTGA TGAGCCTATG GATGAGTTCA CTGCATTAGA TTCCGCACCT ATTACACCCA TTGGGACACC AGGATTGCAC ATAACACTTA ATAGTGATGA GGAGTTTGCC TACTCTAAGG GAGACCCGAT CATCTACAAA GGGCTAACAG TAGGTCAGAT TGAGGATGTC TATTTTAATA TTGATGAGCG GGTTGTCTAT TACAACGCCT TTATCAAATC TCCCTACCAT GAGCTAGTGA CAAGCAATAC TCGCTTTTGG GATGTGAGTG GGTTGACAGT GGATCTCAAC GCTGAGGGGA TATCGGTTAA AACGGGCAAT GTGGAAACCA TGTTAACCAA TGGCGTGACC TTTGATGTTC CAGATGGGAT GCCGCTAGGT GATAAGATCA CCGAGCGGGA TTATTTCGAT ATTTTTAATG ACTATCAAAG TGCCAGTAAC GCACGTTATA AGCATTCACT CCAGTATGTG GTGTTTGTCA GCGACAGTAT CAGAGGGCTA AATGTGGGGG CTCCGGTTGA ATATCGTGGT GTACTCATCG GCCAAGTTGC CTCGGTAAAT TTAGCCACGG CAGATCCTAA TGTGATGTAT AACGAAGCGA TCCGCATTCC AGTGCTAATA AGCTTACACC CAGGGCGAGT GGGGCTACCA GATAATGAGC AAGGCATTAA CTTGATGAAT GAGCAGAATA TGCACTGGGT GAAGAGCGGT TTGCGAGCCA GTTTAAAAAC GGGAAACTTA CTGACAGGCA GCTTGTTTGT TGAATTACAG CACTATGATA TGCCCGCCAT TGACCATATT GAAACCTATG AAGGTTACGC TGTTATTCCT ACGGTGAAAG ATGAGTTCTC TCAAATTGCG GGTAAGTTAG GGCAGTTTGT CGATAAGTTG AATCAGCTAC CACTGGACGA GATAGCAGGC AATGCGAACG GTACTTTGGT TAATGCTTCA GTGTTACTCA AAGATCTGCA AGGCACCAAT CAGAGTTTGG ATAAACTGCT TATCAGTGCT GATCAGCAGG AGCTTATTAG GGAGTTAAGG CTCACGCTGG AAAATGTCTC CTTACTGACA CAAGATTTTT CTGAGGGGTC AGAAGGTTAC GAGGAGCTAG AGGAGGCGAT GAAGAGTATC TCCGATGTAA TGTATGAACT TAAACCTCTG CTTGAACAGT TAAAACACCA GCCAAATGGG CTTATCTTTG ACTCTGGTAC AAAAAATTAT GAACCGAAAA AACATTCAGG GGCTAATCAA TGA
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Protein sequence | MKTDQQVDAD VKQVRGISAI WFVPIVALLI GGWMVYYHWS NQGPVVTLFF ESAEGMEAGK TKIKSRHVNI GEVESITLND AGDGVTVTAR LAKNSEKMLV EDSNFWIVTP KISLSGVSGL DTLISGVYIE IAPGKSDEPM DEFTALDSAP ITPIGTPGLH ITLNSDEEFA YSKGDPIIYK GLTVGQIEDV YFNIDERVVY YNAFIKSPYH ELVTSNTRFW DVSGLTVDLN AEGISVKTGN VETMLTNGVT FDVPDGMPLG DKITERDYFD IFNDYQSASN ARYKHSLQYV VFVSDSIRGL NVGAPVEYRG VLIGQVASVN LATADPNVMY NEAIRIPVLI SLHPGRVGLP DNEQGINLMN EQNMHWVKSG LRASLKTGNL LTGSLFVELQ HYDMPAIDHI ETYEGYAVIP TVKDEFSQIA GKLGQFVDKL NQLPLDEIAG NANGTLVNAS VLLKDLQGTN QSLDKLLISA DQQELIRELR LTLENVSLLT QDFSEGSEGY EELEEAMKSI SDVMYELKPL LEQLKHQPNG LIFDSGTKNY EPKKHSGANQ
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