Gene Swoo_2074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2074 
Symbol 
ID6116337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2543275 
End bp2544927 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content45% 
IMG OID641633577 
Producthypothetical protein 
Protein accessionYP_001760453 
Protein GI170726427 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0955309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAG ATCAACAAGT TGATGCAGAT GTTAAGCAAG TAAGAGGCAT TTCTGCTATC 
TGGTTTGTGC CCATCGTTGC CTTGCTCATT GGTGGTTGGA TGGTCTATTA CCACTGGAGT
AATCAAGGCC CTGTAGTGAC GCTCTTTTTT GAGTCTGCTG AGGGGATGGA AGCGGGTAAA
ACCAAGATTA AGTCTCGGCA TGTGAATATC GGTGAAGTGG AAAGTATTAC CCTTAATGAT
GCTGGCGATG GGGTGACGGT GACTGCAAGG CTTGCTAAAA ACAGTGAGAA GATGCTGGTA
GAGGACAGCA ACTTCTGGAT TGTGACACCC AAAATATCCC TTTCAGGGGT TTCAGGTTTA
GATACATTGA TTTCGGGCGT ATATATTGAG ATTGCACCAG GGAAATCTGA TGAGCCTATG
GATGAGTTCA CTGCATTAGA TTCCGCACCT ATTACACCCA TTGGGACACC AGGATTGCAC
ATAACACTTA ATAGTGATGA GGAGTTTGCC TACTCTAAGG GAGACCCGAT CATCTACAAA
GGGCTAACAG TAGGTCAGAT TGAGGATGTC TATTTTAATA TTGATGAGCG GGTTGTCTAT
TACAACGCCT TTATCAAATC TCCCTACCAT GAGCTAGTGA CAAGCAATAC TCGCTTTTGG
GATGTGAGTG GGTTGACAGT GGATCTCAAC GCTGAGGGGA TATCGGTTAA AACGGGCAAT
GTGGAAACCA TGTTAACCAA TGGCGTGACC TTTGATGTTC CAGATGGGAT GCCGCTAGGT
GATAAGATCA CCGAGCGGGA TTATTTCGAT ATTTTTAATG ACTATCAAAG TGCCAGTAAC
GCACGTTATA AGCATTCACT CCAGTATGTG GTGTTTGTCA GCGACAGTAT CAGAGGGCTA
AATGTGGGGG CTCCGGTTGA ATATCGTGGT GTACTCATCG GCCAAGTTGC CTCGGTAAAT
TTAGCCACGG CAGATCCTAA TGTGATGTAT AACGAAGCGA TCCGCATTCC AGTGCTAATA
AGCTTACACC CAGGGCGAGT GGGGCTACCA GATAATGAGC AAGGCATTAA CTTGATGAAT
GAGCAGAATA TGCACTGGGT GAAGAGCGGT TTGCGAGCCA GTTTAAAAAC GGGAAACTTA
CTGACAGGCA GCTTGTTTGT TGAATTACAG CACTATGATA TGCCCGCCAT TGACCATATT
GAAACCTATG AAGGTTACGC TGTTATTCCT ACGGTGAAAG ATGAGTTCTC TCAAATTGCG
GGTAAGTTAG GGCAGTTTGT CGATAAGTTG AATCAGCTAC CACTGGACGA GATAGCAGGC
AATGCGAACG GTACTTTGGT TAATGCTTCA GTGTTACTCA AAGATCTGCA AGGCACCAAT
CAGAGTTTGG ATAAACTGCT TATCAGTGCT GATCAGCAGG AGCTTATTAG GGAGTTAAGG
CTCACGCTGG AAAATGTCTC CTTACTGACA CAAGATTTTT CTGAGGGGTC AGAAGGTTAC
GAGGAGCTAG AGGAGGCGAT GAAGAGTATC TCCGATGTAA TGTATGAACT TAAACCTCTG
CTTGAACAGT TAAAACACCA GCCAAATGGG CTTATCTTTG ACTCTGGTAC AAAAAATTAT
GAACCGAAAA AACATTCAGG GGCTAATCAA TGA
 
Protein sequence
MKTDQQVDAD VKQVRGISAI WFVPIVALLI GGWMVYYHWS NQGPVVTLFF ESAEGMEAGK 
TKIKSRHVNI GEVESITLND AGDGVTVTAR LAKNSEKMLV EDSNFWIVTP KISLSGVSGL
DTLISGVYIE IAPGKSDEPM DEFTALDSAP ITPIGTPGLH ITLNSDEEFA YSKGDPIIYK
GLTVGQIEDV YFNIDERVVY YNAFIKSPYH ELVTSNTRFW DVSGLTVDLN AEGISVKTGN
VETMLTNGVT FDVPDGMPLG DKITERDYFD IFNDYQSASN ARYKHSLQYV VFVSDSIRGL
NVGAPVEYRG VLIGQVASVN LATADPNVMY NEAIRIPVLI SLHPGRVGLP DNEQGINLMN
EQNMHWVKSG LRASLKTGNL LTGSLFVELQ HYDMPAIDHI ETYEGYAVIP TVKDEFSQIA
GKLGQFVDKL NQLPLDEIAG NANGTLVNAS VLLKDLQGTN QSLDKLLISA DQQELIRELR
LTLENVSLLT QDFSEGSEGY EELEEAMKSI SDVMYELKPL LEQLKHQPNG LIFDSGTKNY
EPKKHSGANQ