Gene Swoo_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2044 
Symbol 
ID6116307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2510402 
End bp2511640 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content48% 
IMG OID641633547 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_001760423 
Protein GI170726397 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.61811e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00641465 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCTAAAC GTCGTGTAGT TGTTACAGGC CTTGGCCTGG TCACCCCTGT TGGTAATACC 
GTAGATTCAA GTTGGGAAGC GTTACTTGCT GGTCAAAGTG GTATCGCTCC TATCACCAAG
TTTGATGCCA GTGAATTTAC GACTCGTTTT AGCGGCTCCG TCAAAGATTT TGATGTTGAG
CAGTACATGT CTAAAAAAGA TGCTCGTAAG ATGGATCTCT TCATTCAGTA CGGTATGGCT
GCTGGCATAC AAGCGATGAC GGATTCAGGT TTGGATATGG CTAAGCTAGA TCCTTCCAGA
GTCGGAACTG CTGTTGGTGC TGGTATGGGC GGAATGCCTC TGATTGAACA GGGTCATTCA
GCGCTGTTGA AAGGTGGTCC AAGAAAGATC TCTCCCTTTT TTGTACCAAG TACCATTATC
AACATGATCT CGGGCCACCT CTCTATTAAG TACGGTATGA CAGGTCCTAA CTTTGCGGTG
ACGACGGCGT GTACTACTGG TGTGCATAAT ATAGGTTTTG CAGCCCGAAC TATCGCCTAT
GGTGATGCGG ATGTGATGAT AGCTGGTGGC GCTGAAGATG TTACTTGTCC TCTGGCTGTT
GGCGGTTTTG GCTCAGCCAA AGCGCTGTCG ACCCGTAATG ACGAGCCACA AGCTGCGAGT
CGCCCATGGG ATAAAGATCG AGATGGCTTT GTCATCGGCG ATGGCGCTGG TGTCATGGTG
ATGGAGGAGT ATGAACATGC CAAAGCTCGT GGGGCTACCA TCTATGGTGA ACTGGTCGGC
TTTGGTATGA GTGGAGACGC ATTCCACATG ACGTCACCAC CAGCAGATGG CGCCGGCGCT
GCTGCTGCAA TGGTTAATGC CATTAAAGAT GCAAAGCTTG AAAAAGAGCA GGTAGGTTAT
ATTAATGCCC ATGGCACTTC GACCCCAGCT GGCGATAAAG CCGAAGTTGC TGCTGTTAAA
TCTGTGTTTG GCGACCATGC CTATAAGCTA CTTGTTAGCT CAACTAAGTC GATGACTGGT
CATCTACTCG GCGCTGCAGG CTCTGTGGAA GCGATTATTA CTCTGTTGGC TTTAAGGGAT
CAAGTGATCC CACCAACATT GAACTTAGAT AATCCCGATG AAGGCTGTGA TTTAGACTTT
GTTCCCCATA CTGCACGCCA ACATGAGTTT GAATATGCAC TGTGTAACTC ATTTGGGTTT
GGTGGTACTA ACGGCTCTCT TCTGTTTAAG AAGCTCTAA
 
Protein sequence
MSKRRVVVTG LGLVTPVGNT VDSSWEALLA GQSGIAPITK FDASEFTTRF SGSVKDFDVE 
QYMSKKDARK MDLFIQYGMA AGIQAMTDSG LDMAKLDPSR VGTAVGAGMG GMPLIEQGHS
ALLKGGPRKI SPFFVPSTII NMISGHLSIK YGMTGPNFAV TTACTTGVHN IGFAARTIAY
GDADVMIAGG AEDVTCPLAV GGFGSAKALS TRNDEPQAAS RPWDKDRDGF VIGDGAGVMV
MEEYEHAKAR GATIYGELVG FGMSGDAFHM TSPPADGAGA AAAMVNAIKD AKLEKEQVGY
INAHGTSTPA GDKAEVAAVK SVFGDHAYKL LVSSTKSMTG HLLGAAGSVE AIITLLALRD
QVIPPTLNLD NPDEGCDLDF VPHTARQHEF EYALCNSFGF GGTNGSLLFK KL