Gene Swoo_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2039 
Symbol 
ID6116302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2506083 
End bp2507111 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content42% 
IMG OID641633542 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_001760418 
Protein GI170726392 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.41894e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0171767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC TGACGCTTGC GTTAGATGTG ATGGGGGGCG ATTATGGCCC CCGCGTCACA 
GTGCCTGCAA CTTTGCAGGC ACTTCATTTA TATCCCTCTC TACATGTTGT CCTTGTTGGC
AACCAGCCTG AAATAGAACA TTTTCTTCCT AAGGCTGAAT CCAGTATTCG TCAAAGAATT
GAGATCCTTC ATACGACTGA AGTCGTCAGT ATGTCAGATC GCCCTGTCCA TGCACTTAGA
AATAGAAAGC AAAGCTCAAT GCGCTTGGCT ATTGAACTGG TGCGTGACGG TAAAGCTCAA
GCTTGCTTAA GTGCAGGAAA TACTGGTGCA CTGATGGCGA TAGCTAAAGT GCTACTTAAG
ACATTACCCG GTATTGATAG ACCAGCTTTG GTAAGTTGTT TACCTGCGGT TAATCAAAAG
CCTGTGTACT TACTTGATCT TGGCGCTAAT GTCTCTTGTT GCAGCGAAAC ACTATTCCAG
TTTGCAGTAA TGGGATCTGT GCTCAGTGAA GCTGTCGATA AGAATGAGCA ACCTAAAGTT
GCACTTTTAA ACGTTGGCAT CGAAGAGATT AAAGGTAACG ATCAAGTTCA ACAGGCAGGA
CAACTATTAC AACAAAGTCC GCAAATTAAC TATGTGGGCT TTATTGAAGG TAATGATCTT
TACTCTGGCA ATGTTGATGT CATTGTTTGT GATGGTTTTG TTGGTAATAT CACATTGAAA
ACCTCTGAAG GAATCGCAAA ATTGTTGGTC AATCAGTTGG AAAAAGGACT GACCAAAGGT
TTTTTTGTGC GATTAATGGC CAAACTAATC GCTCCCCGCA TAAATTCTGT TCTTAAACAG
ATGAACCCCG ACCACTACAA TGGTGCAAGT TTGATAGGAT TGCGCGGAAT TGTAGTAAAA
AGTCATGGCA GTGCCGATGA ATCTGCTTAT TTGCAAGCGA TAACCCTTGC AGTGACAGAG
GCGCAACGTA GACTCCCAAA GATGATTGAA GAACGTCTTG AGTCGATTCT TTTAGATATT
AATAACTGA
 
Protein sequence
MTDLTLALDV MGGDYGPRVT VPATLQALHL YPSLHVVLVG NQPEIEHFLP KAESSIRQRI 
EILHTTEVVS MSDRPVHALR NRKQSSMRLA IELVRDGKAQ ACLSAGNTGA LMAIAKVLLK
TLPGIDRPAL VSCLPAVNQK PVYLLDLGAN VSCCSETLFQ FAVMGSVLSE AVDKNEQPKV
ALLNVGIEEI KGNDQVQQAG QLLQQSPQIN YVGFIEGNDL YSGNVDVIVC DGFVGNITLK
TSEGIAKLLV NQLEKGLTKG FFVRLMAKLI APRINSVLKQ MNPDHYNGAS LIGLRGIVVK
SHGSADESAY LQAITLAVTE AQRRLPKMIE ERLESILLDI NN