| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2037 |
|---|
| Symbol | |
|---|
| ID | 6116300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2505356 |
|---|
| End bp | 2505880 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641633540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760416 |
|---|
| Protein GI | 170726390 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000825431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0155007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCAATAC GCGCTGCTGC GAGTCAGCTT
TCTTATGAAG GTTCGATTCC TGGTAAGCAG TTAAAGCGAT TAAATGAGTT AAGTGCCGGC
GACTGTTCCG ATGTGGCAGT GTCGTTTGAA TGTGGCGTAG ATATACAGGG GATAGTCTAC
CTTAAAGGGA AGGCTGTGAC GGAGCTCACT CTGAATTGTC AACGTTGCAT GACACTATAT
ACCACAAAGG TTACGGTCGA CTTCAATTTC ACTCCCTGTG GGAATGAAGC TGAAATCGAT
GAGCTCCCGG ATGCGTATGA CCCTATTGAG TGTAATGAAA TAGGCGAAGT TCGTCTGCAT
CAATTGATTG AAGATGAATT GATAATCGCT ATGCCCCTTA TACCGATGCA CGCTGACGAA
AGTTGTGGCA AAGGCGATAA AGACATAGTT GTAGGCGAGA TTGAACCTTC TCAAGAGGAG
CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
|
|---|
| Protein sequence | MQTVKIPVSI DPIRAAASQL SYEGSIPGKQ LKRLNELSAG DCSDVAVSFE CGVDIQGIVY
LKGKAVTELT LNCQRCMTLY TTKVTVDFNF TPCGNEAEID ELPDAYDPIE CNEIGEVRLH
QLIEDELIIA MPLIPMHADE SCGKGDKDIV VGEIEPSQEE RPNPFAVLEK LKSK
|
|---|
| |