Gene Swoo_2031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2031 
Symbol 
ID6116294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2495443 
End bp2496999 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content45% 
IMG OID641633534 
Productsulphate transporter 
Protein accessionYP_001760410 
Protein GI170726384 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID[TIGR00815] high affinity sulphate transporter 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.62655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.79554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC TAATTCGTCA CAAAACTGCC AGTAGCAAAG CTGATCTGCT TTCAGGCTTA 
ACGGTTGCAC TCGCACTCGT TCCTGAAGCT GTCGCATTTG CTTTTGTCGC AGGTGTTGAA
CCTATGGTGG GTTTATACGC CGCATTTATA ATGGGGCTAA TTACCGCACT GATTGGCGGA
CGACCAGGCA TGATCTCTGG TGCTACAGGG GCAATGGCTG TTGTCATGGT TGCGCTAGTT
GCAGAACACG GTGTTCAGTA CCTGTTTGCA GCGGTGGTAC TTGCGGGACT TATTCAGGTG
ACATTCGGCT TGCTTAAATT AGGCAAATTT ATCCGTATCG TTCCCTACCC AGTAATGATA
GGTTTTGTTA ACGGTTTGGC CATTGTCATT TTCCTAGCAC AGCTAGGACA ATTTAAAGCT
CCTGATGCTA ATGGTGTTTT GAGCTGGCTT CCTATGGAAC AACTAGGATT AATGCTTGGG
CTTGTGGTAT TGACCATGTT CATCATTCAA TTCTTGCCTA AGCTAACCTC AGCGATCCCA
TCGTCACTTG CCGCAATCGT TACCGTGACC CTTTTGGTCT ACTTCTTAAA TCTCGACACC
CGGACTGTGC TGGATTTTCT AAAGTCCATG AGCGGTGATG AGAATGCGAC TATCGCTGGT
AGCTTACCCA CTTTCTCTAT TCCGGCAGTC TCATTCACGC TGGAAACCCT GTACATCATA
CTGCCCTACT CGCTCATACT TGCGGCTGTA GGCTTAATTG AATCTCTGTT GACCTTAACG
GTTATCGATG AGATGACAAA TAGCCGTGGT AAAGGTAATA AAGAGTGTAT CGGACAGGGT
GTAGGTAATA TCACCAGTGG CTTCTTTGGT GCCATGGGTG GTTGTGCCAT GATTGGTCAA
TCGATGATCA ACATTAACTC TGGTGGACGT GGACGCCTAT CAGGTATTAC TGCTGCACTT
GCCCTACTGG CCTTTATTCT ATTTGGTTCA GCGCTTATTG AGATGATCCC ATTAGCAGCA
TTAGTTGGTG TGATGTTTAT GGTTGTCCTT GGTACGTTTG AATGGGCGAG CTTTAAGGTG
ATGAGAAAAG TCCCTAAGCA TGACGCATTC GTTATCATAC TCGTGACTAT TGTGACCGTA
TTTACCGATC TTGCTTTTGC AGTATTTGTT GGTGTTATCG TATCCGCATT AGTATTCGCG
TGGGAACATG CTAAACATAT CAATGTTGAG ATCAGTGAAG ATGCAAACGG TTGGAAAGTT
TATAAGCTAA ACGGTCCACT GTTCTTCGGC TCAGTGGCAG AGTTTTTAGA TCTGTTCCAG
TCAAACACCG ATCCTGCAGA TGTGATTGTC GACTTCCAAA ACTCTCGTGT TTGCGATCAC
TCAGCACTCG ATGCCATTGA TACGTTAGCA GAGCGCTATG GCTCCAGTGG CAAAAGATTA
CACCTACGTC ACCTAAGTAA TGACTGTAAA GAGTTACTAC ATAAAGCGGG AGACTTAGTT
GAGGTTAACT TAATTGAAGA TCCTCACTAT AAGATTGCTG ATAACAAATT AGACTAA
 
Protein sequence
MFDLIRHKTA SSKADLLSGL TVALALVPEA VAFAFVAGVE PMVGLYAAFI MGLITALIGG 
RPGMISGATG AMAVVMVALV AEHGVQYLFA AVVLAGLIQV TFGLLKLGKF IRIVPYPVMI
GFVNGLAIVI FLAQLGQFKA PDANGVLSWL PMEQLGLMLG LVVLTMFIIQ FLPKLTSAIP
SSLAAIVTVT LLVYFLNLDT RTVLDFLKSM SGDENATIAG SLPTFSIPAV SFTLETLYII
LPYSLILAAV GLIESLLTLT VIDEMTNSRG KGNKECIGQG VGNITSGFFG AMGGCAMIGQ
SMININSGGR GRLSGITAAL ALLAFILFGS ALIEMIPLAA LVGVMFMVVL GTFEWASFKV
MRKVPKHDAF VIILVTIVTV FTDLAFAVFV GVIVSALVFA WEHAKHINVE ISEDANGWKV
YKLNGPLFFG SVAEFLDLFQ SNTDPADVIV DFQNSRVCDH SALDAIDTLA ERYGSSGKRL
HLRHLSNDCK ELLHKAGDLV EVNLIEDPHY KIADNKLD