Gene Swoo_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2030 
Symbol 
ID6116293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2494361 
End bp2495200 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content43% 
IMG OID641633533 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001760409 
Protein GI170726383 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.667101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAG AAACCATAGA TTATCTAGCA CCTAATAGCG CCGAAGAGTT TGTAAAGTCT 
TTAAGAGAAA CCGGCTTTGG TGTACTCAGT AACCACCCTA TCGACAAAGC CCTAGTCGAA
GCTATCTATA TAGAATGGCA AGCATTCTTC AATACTGAGG AGAAACGTGA ATACCTCTTT
AAACCTGAGA CACAAGATGG TTTCTTCCCA GCAGAGATCT CTGAAACAGC CAAAGGCCAT
AGCGTAAAAG ATATTAAAGA ATACTATCAC GTCTATCCGT GGGGCCGTAT TCCAAATAGT
TTAAGAGAGA ATATCCTCGC CTATTACAAT AAAGCCAATG AATTAGCTCA AGAGCTACTA
GGCTGGATTG AATCTTATGC CCCAGCTGAA GTTAAAGCTA AATTCTCCAT ATCTCTGCCA
CAGATGATAG AGAACAGTCA GAAAACCTTA CTTAGGGTTC TGTATTATCC CCCCATGTCA
GGCGATGAAG AGATGGGAGC GATCCGCGCT GCTGCCCATG AAGATATCAA CTTAATCACA
GTACTGCCTG CGGCCAATGA GCCGGGATTA CAAGTACAGG TAAAGGATGG TTCTTGGTTA
GATGTTCCAA GTGATTTTGG CAACATTATT ATCAATATCG GCGATATGCT ACAGGAAGCA
TCTGGTGGTT ATTACCCATC AACAAGCCAC AGGGTGATAA ACCCAGAAGG TGCAGATAAG
AGCAAGTCAC GTATCTCTCT TCCTCTGTTT CTGCATCCGA ATCCAGAGGT GGTGCTCTCA
GACAAATATA CCGCTGATAG CTACTTAATG GAGCGATTAA GAGAGTTGGG GGTAATTTAA
 
Protein sequence
MKLETIDYLA PNSAEEFVKS LRETGFGVLS NHPIDKALVE AIYIEWQAFF NTEEKREYLF 
KPETQDGFFP AEISETAKGH SVKDIKEYYH VYPWGRIPNS LRENILAYYN KANELAQELL
GWIESYAPAE VKAKFSISLP QMIENSQKTL LRVLYYPPMS GDEEMGAIRA AAHEDINLIT
VLPAANEPGL QVQVKDGSWL DVPSDFGNII INIGDMLQEA SGGYYPSTSH RVINPEGADK
SKSRISLPLF LHPNPEVVLS DKYTADSYLM ERLRELGVI