Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2029 |
Symbol | rbgA |
ID | 6116292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2493306 |
End bp | 2494244 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641633532 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_001760408 |
Protein GI | 170726382 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.831437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.492608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATTC AGTGGTACCC AGGACATATG CATAAGGCAC GTAAAGAGAT TGAAGAGGTG ATGCCTCAGG TTGATCTCGT GATCGAGGTG TTAGATGCCA GAATCCCTTA TAGTAGCGAA AACCCTGTCG TTTCAAGCTT ACGTGGCGAT AAGCCCTGTA TCAAACTACT GAATAAGTCA GATCTCGCCG ATCCTGAAAC CACTCAACGC TGGATAGAGT ACTTAGAGCG CGAACAAGGT GTTAAGGCGA TGGCCATCAC CACACTGCAA GCGGCCCAAG TGAAAAAAAT TCCCGATCTG TGTCGCAAAT TTGTACCAAG TCGCGACAAG ATAGAGAAAG ATATTCGTAC CATGATTATG GGAATACCTA ACGTAGGTAA GTCTACCATC ATCAATACAC TGGCAGGCAG AACGATTGCC AAAACAGGGA ATGAGCCCGC CGTCACTAAA GTGCAGCAAC GAATCAACCT AAGAAACGGT ATTGTTCTCT CCGATACCCC AGGGATCTTG TGGCCAAAAG TCGATAATGA GAAAAGCAGC TATCGCTTAG CCATTACAGG TGCGATTAAA GATACAGCCA TGGAGTATGA GGACGTGGCC ATGTTTGCGG CAGAGTACTT CCTACAAGCC TATCCAGAGG CGATTGCCGA GCGTTACAAG CTTAAAGAGC TGCCCGATAC TGATATCGAG CTACTCGAAG CCATTGGCCG TAAAAGAGGC GCGCTACGAC CTGGCGGACG AATCGATCTG CATAAGGTAT CAGAACTGGT ACTTCACGAG TTTCGCTCTG GTAAAATAGG CCAACTTAGC TTAGAAACTC CAGAGATGGC TGAAATTGAG AAAGAGGAAG TGGCTATCTT AATGGCGAAG AAAGAAGCTG AAAAGCAAGC CAAAGAGGAA GCTGAGAAGC TTAAACGATC TGGTAAGCGA TACAAGTAG
|
Protein sequence | MAIQWYPGHM HKARKEIEEV MPQVDLVIEV LDARIPYSSE NPVVSSLRGD KPCIKLLNKS DLADPETTQR WIEYLEREQG VKAMAITTLQ AAQVKKIPDL CRKFVPSRDK IEKDIRTMIM GIPNVGKSTI INTLAGRTIA KTGNEPAVTK VQQRINLRNG IVLSDTPGIL WPKVDNEKSS YRLAITGAIK DTAMEYEDVA MFAAEYFLQA YPEAIAERYK LKELPDTDIE LLEAIGRKRG ALRPGGRIDL HKVSELVLHE FRSGKIGQLS LETPEMAEIE KEEVAILMAK KEAEKQAKEE AEKLKRSGKR YK
|
| |