| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2021 |
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| Symbol | |
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| ID | 6116284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2483664 |
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| End bp | 2484341 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633524 |
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| Product | ABC transporter related |
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| Protein accession | YP_001760400 |
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| Protein GI | 170726374 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.873948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCAA TTACAATCAA TGGTTTGAGT AAATCCTATA AACTCAAAAA GCAAGAGATC
CCAGTACTGC ACGATATTGA ACTCAATATT GAGCAAGGGG AGTTTGTTGC TTTGATGGGC
CCCTCTGGTT CTGGTAAGTC AACATTACTA AATGTGATTG GTGGTATTGA TAAATCTGAT
TCGGGGGAGG TATTAGTCGC GGGAAAACGG CTTGATGAGT GCTCTGATAG TGAACTGACA
AAGTGGCGTG GTGATAATGT CGGGATCGTT TTTCAATCAT ATAATCTCAT TCCTGTTCTC
TCTGCAGAAG AGAATGTTCG GTTACCCCTT TATAAGACTA AGCTGAGTCG AAAAGAGCAA
AAAAAACGTG TTGCAGCTGC TTTGGAGTTA GTTGGTCTCG CCGATCGCGC CAAGCATAAA
CCAACGCAGT TATCTGGAGG GCAGCAACAA CGAATAGCGA TAGCTCGAGC ACTTGTCTCT
AATGCCAGTA TATTGATCTG TGATGAGCCC ACGGGTGACT TAGACCGTGA GATGGCCGAC
AAGGTTTTAG GGCTTTTAAA AACACTCAAT ACGAGTATTG GTAAATCAAT CATCATGGTC
ACTCATGATC CAAAAGCTGC GAGTTATGCT GACAGAATAT TGTATATGGA TAAGGGATAC
ATTGAGGATA CAGTATGA
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| Protein sequence | MSAITINGLS KSYKLKKQEI PVLHDIELNI EQGEFVALMG PSGSGKSTLL NVIGGIDKSD
SGEVLVAGKR LDECSDSELT KWRGDNVGIV FQSYNLIPVL SAEENVRLPL YKTKLSRKEQ
KKRVAAALEL VGLADRAKHK PTQLSGGQQQ RIAIARALVS NASILICDEP TGDLDREMAD
KVLGLLKTLN TSIGKSIIMV THDPKAASYA DRILYMDKGY IEDTV
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