Gene Swoo_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2011 
Symbol 
ID6116274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2470339 
End bp2471334 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content38% 
IMG OID641633514 
Producthypothetical protein 
Protein accessionYP_001760390 
Protein GI170726364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.311763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGT TAGATGTTTC CGCTTTTAGT GGAGTGCATT GTGAATCAAC CACAATGGTA 
AATTTACTCA GTCAAAGAGG GATTGATATA AGTGAGGCTA TGGTGTTTGG GCTTGGTAGA
GGCTTAGATT ATATATATTG GAAATCTAAA TTGATGCCTT ATCCATTTAT CGGTGGAAGA
GTTAAACCAG ATAAGTTGAC TGAGTTTTTC TCTGAAAATT TGGATATTAC CATTATAAGA
AAAGAGACCG GTTCAATCGA TAAAGCTTGG CAAAATCTAG TCAGTGAAAT CGATGCGGGA
AACTTAGTCG GCCTTAAGTT AGACAGTTAC TTTCTTGAGT ATTGTAGTGA GACTTTTCAC
TTCCCATCAC ATTATCTGAC CTGCTATGGA TATGATAATG AGAGGGTGTA TTTGATCGAT
AGTATGGGGA GTGAAGAGCG CTACTCTACA AGTCGAGATA GCCTCTCGAA GGCGAGAAGT
TTCAAAGGGC CCATGTCTTC AAAAAGTCTA TCTTATACGT TGGCAGAACA CGACATTAAG
TTTGATCTCG AAGAGGTCAT TCCGAAAGCT ATTACTCAAA ATAGTGAGTC TTACCTGAAC
CCTCCGATTA AAAATATGTC TTTTAAAGGG ATATGCAAAA CAAGTGAAGT TATGAAGGAC
TGGTTAACAA CCCTTGAAAA TCCAAAAGAG AACTTAGCTT CAATTGCCTA TATAATGGAA
CACGCTGGAA CGGGAGGGGG GTTATTTCGT AAACTCTGGG CGACCTACCT ACAAGAGTGT
TCTCAGATCA TTACTCATCC AGGTCTTGAT GATATTAGTG CAAGATTTTT TGAAATTGGA
GAAGCGTGGA GTCAAGTTTC CAACTTATTA GAAAATACTG CAGAATTATT GGATAAAAGG
TTGCTGTTAG AAGCATCAAG TATTCTGTTA CGTATTGCTG AGGATGAGAA GAGTGCTATG
AAGGATCTTC ACTCCTTAGT CATTAATAAA ATGTGA
 
Protein sequence
MTMLDVSAFS GVHCESTTMV NLLSQRGIDI SEAMVFGLGR GLDYIYWKSK LMPYPFIGGR 
VKPDKLTEFF SENLDITIIR KETGSIDKAW QNLVSEIDAG NLVGLKLDSY FLEYCSETFH
FPSHYLTCYG YDNERVYLID SMGSEERYST SRDSLSKARS FKGPMSSKSL SYTLAEHDIK
FDLEEVIPKA ITQNSESYLN PPIKNMSFKG ICKTSEVMKD WLTTLENPKE NLASIAYIME
HAGTGGGLFR KLWATYLQEC SQIITHPGLD DISARFFEIG EAWSQVSNLL ENTAELLDKR
LLLEASSILL RIAEDEKSAM KDLHSLVINK M