| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1987 |
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| Symbol | |
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| ID | 6116250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2444524 |
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| End bp | 2445750 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633490 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_001760366 |
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| Protein GI | 170726340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00560489 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAAATC GGGTGTGGTT GTTTTTCTTT GTAACGGCGA TGATTGCCAT CTTTATTCAA
CTTTTTAATG GCAATATTGA GGTGCTATCA AGCTCAGTAA ACGCCCTCTT TGACAGCTCA
AAGCTTGCTG CTGAAATCGC ATTAGGATTA ATTGGTGTGC TTTCTTTGTG GATGGGCCTG
ATGAGGGTGG GAGAGAAAGC GGGCGTGGTC GGTTTCTTTG CTAGCTTGTT TGAGCCATTA
CTCTCCCGTT TAATGCCTGA AGTGCCCAGA GGACATCCAG CTTACGGCAG TGTGACCATG
AATCTAACTG CTAATATTTT GGGTTTGGAT AATGCCGCGA CACCTCTTGG GTTAAAAGCG
ATGCAAGATC TGCAGAGTTT AAACCCTGAA AAATCAGTGG CCACCAATGC GCAGATCCTG
TTTTTAGTGC TTAATACCTC ATCCGTCACA CTGGTGCCTG TGACCGTGTT TTTGTACCGT
GCCCAACAAG GCGCCGCAGC ACCTGCAGAT ATCTTTCTAC CTATCTTGTT AGCAACAACT
GCATCGACCT TAGCGGGTGT CATCATTGTA TCGCTGTTTC AGCGAATATC ACTATTCAAT
GCAGTGGTGA TGGGGTATGG CGCAGTGATA TTTGGCTCTA TTATGGCATT AGTGTTTTAT
CTGGGCACCT TGACGACGAC GGCTATAGGA ACCTTGTCGA CAGCGATGGG TAATGGGATA
TTACTGCTGC TGGTGTTTAG TTTTATACTG GTGGCCGGAT TACGTAAAGT CGCTGTGTAT
GATGAATTTA TTACGGGGGC GAAAGAGGGG TTTGCTCAGT CAATAAAGCT AATCCCATAT
CTGCTTGCTA TGTTGCTGGC CATTGCGTTA TTGCGCGCCT CAAGTGCGTT AGATTATCTG
CTAAATCTGA TCTCTGTGCT AGTTTCTGTT GTCGGTGGCG ATACGCGTTT TGTTGATGCG
TTGCCAACGG CCATCATGAA ACCTTTTAGT GGTTCAGGAG CCAGAGCCAT GATGTTAGAG
ACCATGGAGC ACCATGGTGT CGATTCATTT GCTGGACGTT TAGCCGCAGT ATTCCAAGGA
AGTACTGAAA CCACTTTTTA CGTCTTAGCT GTCTATTTTG GCGCGGTGGG GATTAAAAAT
GGACGACATG CGTTAGCCTG TGGTTTAACA GCAGATTTTG CTGGAATAGT CGCAGCCATT
TGTGTCTGTT ATTACTTTTA TGGGTAG
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| Protein sequence | MLNRVWLFFF VTAMIAIFIQ LFNGNIEVLS SSVNALFDSS KLAAEIALGL IGVLSLWMGL
MRVGEKAGVV GFFASLFEPL LSRLMPEVPR GHPAYGSVTM NLTANILGLD NAATPLGLKA
MQDLQSLNPE KSVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAAAPAD IFLPILLATT
ASTLAGVIIV SLFQRISLFN AVVMGYGAVI FGSIMALVFY LGTLTTTAIG TLSTAMGNGI
LLLLVFSFIL VAGLRKVAVY DEFITGAKEG FAQSIKLIPY LLAMLLAIAL LRASSALDYL
LNLISVLVSV VGGDTRFVDA LPTAIMKPFS GSGARAMMLE TMEHHGVDSF AGRLAAVFQG
STETTFYVLA VYFGAVGIKN GRHALACGLT ADFAGIVAAI CVCYYFYG
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