Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1987 |
Symbol | |
ID | 6116250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2444524 |
End bp | 2445750 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633490 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_001760366 |
Protein GI | 170726340 |
COG category | [R] General function prediction only |
COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00560489 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTAAATC GGGTGTGGTT GTTTTTCTTT GTAACGGCGA TGATTGCCAT CTTTATTCAA CTTTTTAATG GCAATATTGA GGTGCTATCA AGCTCAGTAA ACGCCCTCTT TGACAGCTCA AAGCTTGCTG CTGAAATCGC ATTAGGATTA ATTGGTGTGC TTTCTTTGTG GATGGGCCTG ATGAGGGTGG GAGAGAAAGC GGGCGTGGTC GGTTTCTTTG CTAGCTTGTT TGAGCCATTA CTCTCCCGTT TAATGCCTGA AGTGCCCAGA GGACATCCAG CTTACGGCAG TGTGACCATG AATCTAACTG CTAATATTTT GGGTTTGGAT AATGCCGCGA CACCTCTTGG GTTAAAAGCG ATGCAAGATC TGCAGAGTTT AAACCCTGAA AAATCAGTGG CCACCAATGC GCAGATCCTG TTTTTAGTGC TTAATACCTC ATCCGTCACA CTGGTGCCTG TGACCGTGTT TTTGTACCGT GCCCAACAAG GCGCCGCAGC ACCTGCAGAT ATCTTTCTAC CTATCTTGTT AGCAACAACT GCATCGACCT TAGCGGGTGT CATCATTGTA TCGCTGTTTC AGCGAATATC ACTATTCAAT GCAGTGGTGA TGGGGTATGG CGCAGTGATA TTTGGCTCTA TTATGGCATT AGTGTTTTAT CTGGGCACCT TGACGACGAC GGCTATAGGA ACCTTGTCGA CAGCGATGGG TAATGGGATA TTACTGCTGC TGGTGTTTAG TTTTATACTG GTGGCCGGAT TACGTAAAGT CGCTGTGTAT GATGAATTTA TTACGGGGGC GAAAGAGGGG TTTGCTCAGT CAATAAAGCT AATCCCATAT CTGCTTGCTA TGTTGCTGGC CATTGCGTTA TTGCGCGCCT CAAGTGCGTT AGATTATCTG CTAAATCTGA TCTCTGTGCT AGTTTCTGTT GTCGGTGGCG ATACGCGTTT TGTTGATGCG TTGCCAACGG CCATCATGAA ACCTTTTAGT GGTTCAGGAG CCAGAGCCAT GATGTTAGAG ACCATGGAGC ACCATGGTGT CGATTCATTT GCTGGACGTT TAGCCGCAGT ATTCCAAGGA AGTACTGAAA CCACTTTTTA CGTCTTAGCT GTCTATTTTG GCGCGGTGGG GATTAAAAAT GGACGACATG CGTTAGCCTG TGGTTTAACA GCAGATTTTG CTGGAATAGT CGCAGCCATT TGTGTCTGTT ATTACTTTTA TGGGTAG
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Protein sequence | MLNRVWLFFF VTAMIAIFIQ LFNGNIEVLS SSVNALFDSS KLAAEIALGL IGVLSLWMGL MRVGEKAGVV GFFASLFEPL LSRLMPEVPR GHPAYGSVTM NLTANILGLD NAATPLGLKA MQDLQSLNPE KSVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGAAAPAD IFLPILLATT ASTLAGVIIV SLFQRISLFN AVVMGYGAVI FGSIMALVFY LGTLTTTAIG TLSTAMGNGI LLLLVFSFIL VAGLRKVAVY DEFITGAKEG FAQSIKLIPY LLAMLLAIAL LRASSALDYL LNLISVLVSV VGGDTRFVDA LPTAIMKPFS GSGARAMMLE TMEHHGVDSF AGRLAAVFQG STETTFYVLA VYFGAVGIKN GRHALACGLT ADFAGIVAAI CVCYYFYG
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