Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1975 |
Symbol | |
ID | 6116238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2432891 |
End bp | 2433388 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641633478 |
Product | CreA family protein |
Protein accession | YP_001760354 |
Protein GI | 170726328 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00187565 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00464967 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAACC TTAAGCTGTT AAGAACTGCC TCATTGGTGG TGGTGATGTG TAGTGGACTT AGTGCCTGTG GTGACGACGT GGCTAAAGTG AGTTTAGGCA TGTTTACCAC CAAAGATGTG CTTATTGACG CAAAGCATGA TCCTAAAATA CCCGGTGTGA CCTGTCATAT TAGCCGCGTT GAAGCAAATT TGAGTATGGC CGATCCCTCT GATATGAGTA TCTCTTGTCG TCAAACAGGC CCTATTACCC CAGCTGAAAT TGCCAGTATA GATAAAAGTA AAAACGGCGA AATAGTCTTT AAGCAGTCTT TGAGTATATT GTTTAAATCA TTAAAGGTTC GCCGTATATA TGATGCAGAG AATCAAACTT TACTCTACCT CTCTTACTCG ACTAAAGAGA CCAAGGGCAG TGATAAACAT GCACTGTCTA CGGTTCCTCT CTATGGCACT CAAGCTTGGG TAAAACCAGC TGTCCCTGTA GCAGAACAAG TTAATTAA
|
Protein sequence | MKNLKLLRTA SLVVVMCSGL SACGDDVAKV SLGMFTTKDV LIDAKHDPKI PGVTCHISRV EANLSMADPS DMSISCRQTG PITPAEIASI DKSKNGEIVF KQSLSILFKS LKVRRIYDAE NQTLLYLSYS TKETKGSDKH ALSTVPLYGT QAWVKPAVPV AEQVN
|
| |