| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1951 |
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| Symbol | ushA |
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| ID | 6116214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2397133 |
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| End bp | 2398899 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633454 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001760330 |
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| Protein GI | 170726304 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00846819 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0330324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATA AGCTAGTAAA AGGTGTTGTC GCAACGGCTG TCTTAGCCGC ATTGGCGGGC
TGTAATAGCA GCGACGATAA CAATACTCCA CAAACAGCAT GTGAAGCTGC GGGCGATGCA
TGTACTAAAT TCACCGTTAT CCATACTAAT GATAACCATG GTCGCTTCTG GCAAAACAGT
AAAGGCGAAT ATGGTATGGC GGCACGTAAA ACCGTTATCG ATCAAATTCG TAATGAAGTT
GACCACGCAG GTGGTGAGAC CATTCTACTC TCTGGCGGTG ACATCAATAC CGGTGTTCCA
GAGTCAGATA TGCAAGATGC AGTACCTGAT TTTATCGGTA TGAGCATGCT GGGCTATGAT
GCAATGGCTG TAGGTAATCA TGAGTTTGAT AACCCGTTAA GCACATTAGA TATGCAGGCA
ACGATTGCTC AGTTCCCTAT GCTAGCTGCT AACATCTATA AAAAAGACAG CAATGGAGAG
GTCACTTCAG AGCGTTATTT TGAACCTTAC CGTGTCTTTG AAATTAACGG TCTTAAGGTG
GCTATTATCG GCTTCACAAC GGTTGATACT CCTAAAGTTG TGAGCCCAGA TAACGTTGCC
AGCCTACATT TCACTAAGCC TCAAGATGAA ATTCAAACCG TTCTTGCTGA AATCGAAGCC
AATGAAAAGG TTGACATGGT GTTTGCTTTG ACACATATGG GTCATTATGC CAATGGTGAG
CACGGTACGG AAGCTGCTGG TGATGTGAAA CTAGCTCGCT CATTAGAGCA GGGCCAATTA
CAGGCGATTA TCGGTGGTCA CTCACAAAAC CCTGTGTGTA TGGAAGGTGA TGGTTACGCT
GACTTTAAAC CGGGTGATGA GTGTAAACCT GATGTTCAAA ACGGCACCTT TATTATGCAA
GCCCATGAGT GGGGCAAGTA TGTTGGCCGT GCTGATTTCG AATACATGGA CGGTGAGTTG
AAGCTGGCTA GCTATAAGCT GATCCCAATT AACCTGAAAG AGAAAAATGA AAACGATGAG
CTTGTTTTCA TTACTGAAGA GATAGAGCAA GACCAACTGG TGATTGATGC ACTACAGCAT
TACCAAGATC TGGGCCAGGA GCTACTTGAT GTGGTTATCT CAAGTACAGA TGGTAAGCTT
GAAGGTGATA GAGCCGTTGT TCGCACAGAA CAAACCAACT TAGGCCAGCT ACTAACTCGC
GCTTATGGCG ATTGGGTCAC GGCTAATTTT GAGCCAACAG TCGATTTCGG TGTGATGAAC
TCAGGTGGTA TCCGTGACTC TATCGCACCA GGCACAGTGT CATACCGCGA CGTGTTAACG
GTGCAGCCAT TTAGTAACGA TGTGTCATTC GTGACGATGT CAGGTAAAGA AGTTCAGGAT
TACCTTGCCA ATGTAGCACT AAAGACCGGT GGTGGAATGG CGCAGCTTTA TCCTTTAGAG
ATGAACGTGA GCTGTGATGC TGTTGAAGTT AATCCAGATG CTACCTCTGC TGATATCGTG
CAGATCACAT CGTTAGGTGG CCGTGCGTTT GATATGGCGG GTAACTACAC TTTCTCATTG
ATCAACTTCA GTGCTAAAGG TGGTGACGAT TATCCAAAGA TCACAGAGCA TGTAAACTAT
GTTGATACTC AGCGTAGCGA TGCATCGGTT CTTCGCGAAT ACTTTGAAAA GAACCCTAAT
ATCAAAGTGG CTGATTACGA TCCTGCCCAA GGTGGACACC CTGTGTTCTA CCGTGGTGGT
GCTGTCGTTA AGAGCTGTGC TAAGTAA
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| Protein sequence | MINKLVKGVV ATAVLAALAG CNSSDDNNTP QTACEAAGDA CTKFTVIHTN DNHGRFWQNS
KGEYGMAARK TVIDQIRNEV DHAGGETILL SGGDINTGVP ESDMQDAVPD FIGMSMLGYD
AMAVGNHEFD NPLSTLDMQA TIAQFPMLAA NIYKKDSNGE VTSERYFEPY RVFEINGLKV
AIIGFTTVDT PKVVSPDNVA SLHFTKPQDE IQTVLAEIEA NEKVDMVFAL THMGHYANGE
HGTEAAGDVK LARSLEQGQL QAIIGGHSQN PVCMEGDGYA DFKPGDECKP DVQNGTFIMQ
AHEWGKYVGR ADFEYMDGEL KLASYKLIPI NLKEKNENDE LVFITEEIEQ DQLVIDALQH
YQDLGQELLD VVISSTDGKL EGDRAVVRTE QTNLGQLLTR AYGDWVTANF EPTVDFGVMN
SGGIRDSIAP GTVSYRDVLT VQPFSNDVSF VTMSGKEVQD YLANVALKTG GGMAQLYPLE
MNVSCDAVEV NPDATSADIV QITSLGGRAF DMAGNYTFSL INFSAKGGDD YPKITEHVNY
VDTQRSDASV LREYFEKNPN IKVADYDPAQ GGHPVFYRGG AVVKSCAK
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