Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1870 |
Symbol | |
ID | 6116133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2311076 |
End bp | 2311936 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641633373 |
Product | heat shock protein HtpX |
Protein accession | YP_001760249 |
Protein GI | 170726223 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000398337 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000273108 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTATTT TTTTATTGAT TGCTACCAAT ATGGCAATCT TACTTGTGGC CTCTATTGTG ATGTCACTTC TAGGGGTTAA CACTTCAACC ATGGGCGGAC TGCTTGTATT CGCCGCGATT TTTGGTTTCG GTGGCGCCTT TATTAGTTTG GCAATCTCAA AGTGGATGGC TAAAAAAACC ATGGGTTGTG AAGTGATAAC AGCCCCTCGT GATAACACTG AGCGTTGGTT GGTTGAAACC GTTGCTCGTC AAGCCGAGCA AGCTGGCATT AAGATGCCAG AAGTGGCTAT CTACCAGTCA GAAGAGCTGA ACGCATTTGC GACAGGCCCA AGCAAAGATA ATGCACTGGT TGCCGTCAGT AGCGGATTGC TTTATGGCAT GAGCCAAGAT GAGATTGAGG GTGTACTTGC TCACGAAGTA AGCCATGTTG CTAACGGTGA TATGGTGACC TTAACCCTTA TTCAAGGTGT AGTGAACACC TTCGTAATCT TCGCGGCCCG TGTTGTTGCC GGTATTATCG ATAACTTTGT GTCGAGTAAT GACGAAGAGG GTGAAGGCCT AGGCATGTTC GCATACATGG GGGTTGTCTT TGTTCTGGAT ATGCTATTTG GTATTCTCGC TTCTATGATC GTGGCTTACT TCTCTCGTAT TCGTGAGTTT AAAGCCGATG AAGGCGCTGC TAAACTTGCC GGTAAAGAGA AGATGATTGC CGCGCTTGAG CGTTTACGTC AAGGGCCTGC AACAGGTGCC ATGCCTGCCC AAATGTCTGC ATTAGGCATT AACGGCAAAA AGTCTATGTC TGAACTAATG ATGAGCCATC CTCCATTAGA GAAGCGTATT GCAGCACTGC GTAACAGCTA A
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Protein sequence | MRIFLLIATN MAILLVASIV MSLLGVNTST MGGLLVFAAI FGFGGAFISL AISKWMAKKT MGCEVITAPR DNTERWLVET VARQAEQAGI KMPEVAIYQS EELNAFATGP SKDNALVAVS SGLLYGMSQD EIEGVLAHEV SHVANGDMVT LTLIQGVVNT FVIFAARVVA GIIDNFVSSN DEEGEGLGMF AYMGVVFVLD MLFGILASMI VAYFSRIREF KADEGAAKLA GKEKMIAALE RLRQGPATGA MPAQMSALGI NGKKSMSELM MSHPPLEKRI AALRNS
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