Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1861 |
Symbol | |
ID | 6116124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2300905 |
End bp | 2302953 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641633364 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001760240 |
Protein GI | 170726214 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 [COG3302] DMSO reductase anchor subunit |
TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.132192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000573852 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTATAG AAAACATAGA AGAGCCAAAA ATAACAGCTA GCATCAAGAA AGTTGATGTC GATCTGTATA TCCCTGAGCA GGCAACGAGT ACAAGTTCAA AAAAAGAGAC GGCCTCAAAT AGAGCTGAGG AGAATAAAGA GCAACAGGGA CGCTCAAATC ACTGGGAAGT GAGAACAGAT GAGCAAGCTT ATGCTTATTT GCCAAAAACA GAAAGTGAAA TTGAAAATCG TTACGGCAAG CGAATTGATC TTGTTGAGTT GACCGATAAA CCGGTAGGTC GCTCCATGTT TATTAATGAC AACCCGCAAG TTGGCACTAA TTCAGATCGT AATAAACAGC ATGGGTTTTT CTTTACCGCC GATAACTGTA TCGGCTGTCA TGCCTGTGAG TCAGCCTGTT CTGAGAAGAA TGATAATCCT GCGCACTTGG CATTTCGCTC TGTAGGGTAT GTGGAGGGGG GCTCATACCC AGATTATAAA CGGATGAATA TCTCCATGGC CTGTAACCAT TGTGATGATC CGGTGTGTTT AAAAGGGTGT CCAACGAGGG CATACACCAA ACATGCGGAG TATGGCGCTG TATTGCAAGA CCCTGAGACC TGTTTTGGTT GCGGTTACTG CACTTGGGTT TGCCCCTACA ATGCACCTCA GTTAGATCCA GTAAAAGGGC AGGTATCTAA ATGTAATATG TGTGTCGATA GGCTCGAAGT TGGACTTAAG CCTGCTTGTG TGTCGGCGTG TGTGGGTAAC GCGCTCGATT TTGGCGTGAT AGAGAATACA CCAGAGAACA GAGAGCAGTG TAAAACCGCT ATACCTGGCT TTCCATCTCC TGAGATCACC CATCCCAATA TTCGTTTTCA GCAGACAAAA ACACTACCTG ATGAGCTGAC TCGCACTGAC AATATGCCAG TTAAATACCA TAAGGATCCC CAAGGTCATT ATCAGCCTGT GGTGGATCAA AAGGTGGGTA AGCAAAAACA TTGGAATCTG CAAAAGTTAA ACAGTCGAGA AAACCCTCTG GTGCTATTTA CCTTGTTGGC GCAAGCTGCA CTGGGGGCAT TTATCATTCC ATTTTTAGGG GCACTAGCAG GCATAGAGAT GTTTGAGGTA TTTATCGGCT CTAACTTCTT CCTGCCATTG GTGTTACTTT CAATTGTGCT GATGTCACTG GGCTTATTTA TGAGTGTGAC TCACTTAGGC AAACCTTTTC GTTTTTACCG AGGTTTTAAT AATCTGCGTT ACTCACCCAT GAGCCGCGAA GGTTTTGGTT TAGCGATGTT CTCAGCAGGC CTTGGAGTGA CTTCACTGTT ACTTTTACCA AGCAATGCGT GGGTTATCAG CTCAATAAAC CAGCTAATTG GGGTTGATTT ATCTGCGTCA GTATCAGGAT TAACCTTAAA GCCTTGGGTG CTTGGATTTG GGGGATTTGC GACCCTTGCT GGATTAGCAG GCCTCTATTA TATGAACCAG TGTTATCAAA TTAAGGCCAG ACCCTTCTGG AATCATTGGC AAACAGTAAC AAGCTTTGTG GGTAACAGCT TGTCTTTAGG CGTTATGGTC AGTGGTGCAG TTTTACTCAT CTCAATCGAC GTTGAGGGGG CAGGTTTCTC TGATGCACTG CAGATACTTG GGCTAATATT TGTGCTGGGA CAAATGATAG AGGCGGTTGG CTTGATTGGG CACAATATGA TGCTTAATCG AAGTGAAAAT GAAGGCGGGG CGGCTCACTA TGTCCAATGC ACTACATTTG GTAAAACCTA TCTGCTACGT AACTATCTGC TAGGTTTTAA CCTCTTTATG GGGTGTGGTT TACTGATGAC TGCTCAGGTG CAAGATGTGA GTGAGCCCAT CACTGTTGCA GTCTGGTTGA GCTTAAGTTT AGTCAATATT GTGACTGCAG TTATCGGCAG GGCGCTATTT TATAATCTCG TGATCCCGAC GACGATGCCT GGTGCTTTTT TCTGGAAGAA CAAAGGGTTT GAGCAACACG CAAGGGATGT AGGACTGGCT GATAATCCAG CTTGCGGTGT CGCGCCTTTA GCTCATTAA
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Protein sequence | MSIENIEEPK ITASIKKVDV DLYIPEQATS TSSKKETASN RAEENKEQQG RSNHWEVRTD EQAYAYLPKT ESEIENRYGK RIDLVELTDK PVGRSMFIND NPQVGTNSDR NKQHGFFFTA DNCIGCHACE SACSEKNDNP AHLAFRSVGY VEGGSYPDYK RMNISMACNH CDDPVCLKGC PTRAYTKHAE YGAVLQDPET CFGCGYCTWV CPYNAPQLDP VKGQVSKCNM CVDRLEVGLK PACVSACVGN ALDFGVIENT PENREQCKTA IPGFPSPEIT HPNIRFQQTK TLPDELTRTD NMPVKYHKDP QGHYQPVVDQ KVGKQKHWNL QKLNSRENPL VLFTLLAQAA LGAFIIPFLG ALAGIEMFEV FIGSNFFLPL VLLSIVLMSL GLFMSVTHLG KPFRFYRGFN NLRYSPMSRE GFGLAMFSAG LGVTSLLLLP SNAWVISSIN QLIGVDLSAS VSGLTLKPWV LGFGGFATLA GLAGLYYMNQ CYQIKARPFW NHWQTVTSFV GNSLSLGVMV SGAVLLISID VEGAGFSDAL QILGLIFVLG QMIEAVGLIG HNMMLNRSEN EGGAAHYVQC TTFGKTYLLR NYLLGFNLFM GCGLLMTAQV QDVSEPITVA VWLSLSLVNI VTAVIGRALF YNLVIPTTMP GAFFWKNKGF EQHARDVGLA DNPACGVAPL AH
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