Gene Swoo_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1842 
Symbolfur 
ID6116105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2279504 
End bp2279935 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content43% 
IMG OID641633345 
Productferric uptake regulator 
Protein accessionYP_001760221 
Protein GI170726195 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.22874e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0218944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG GAAATCAAGC GCTAAAGAAA GCGGGTTTGA AAGTTACCTT ACCACGAGTC 
AAGATCCTAG AACTGATGCA AGGACCAGAA AACCAGCACA TCAGTGCCGA AGATCTCTAT
AAGAGATTGC TCGACTTAGG TGAAGAGATT GGCTTAGCTA CTGTCTATCG AGTTTTAAAC
CAGTTCGATG ATGCAGGTAT TGTGACACGC CATCATTTCG AAAGCGGGAA GGCAGTATTT
GAGTTAGCAA CGCAGCACCA CCATGACCAT CTGGTTTGTC TGTCTTGCGG TAAAGTCATC
GAATTTTCTG ATGATGTTAT TGAAACTCGT CAAGATGAGA TCGCGATGAA GCACAACATT
AAACTGACCA ACCATAGTTT ATATCTCTAT GGCGTTTGTA CCAATGATGA GTGCAACCAC
GGCGAAGCAT AA
 
Protein sequence
MTDGNQALKK AGLKVTLPRV KILELMQGPE NQHISAEDLY KRLLDLGEEI GLATVYRVLN 
QFDDAGIVTR HHFESGKAVF ELATQHHHDH LVCLSCGKVI EFSDDVIETR QDEIAMKHNI
KLTNHSLYLY GVCTNDECNH GEA