| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1830 |
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| Symbol | |
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| ID | 6116093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2264042 |
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| End bp | 2265121 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633333 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001760209 |
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| Protein GI | 170726183 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.495597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCTC TAAATAAACG TGCTAATAAC TATTTCAAAC TTGCCCTTCC ATTAGTTTTA
GTCGGCGTAT TAAGTGCCTG TGGCGCAGAA GAGGAAATTA AAGAGGAGGA GAAGTACGCC
GTACCAGTAG AAACAACCAC TGTGATTCAA GGAGACGTCT CCTCATTTTA CAGTACAACA
GCTACCTTAG AAGCTCCACA AGAAGCCAAT GTCGTTACTC GGATCTCAGG TTTAATAGAG
AGCATCAATG TTGAAGAGGG AGACAGAGTC ACTAAAGGTC AACTACTTGC TGTTATCGAT
GCCAAAAGAC AAAAATATGA ACTAGCCCGC TCACAAGCAG AAGTTGAGAT TATTGAGCAG
GAGCTAAACC GCCTCAAAAA GATGAACAAC AAAGAGTTTT TCAGTGCTGA CTCAATGGCA
AAGCTTGAAT ACAACTTGCA AGCTGCTATC GCAAAACGAG ACTTGGCCGC GCTTCAAGTT
GAAGAGAGCA TGGTTCGTTC ACCCATTGAT GGCGTAATAG CAACCCGATT TGTCAAAGCT
GGCAACATGG CGAAAGAGTT CGAAGAGTTG TTTTATGTTG TTGATCAAGA TGAACTTTAT
GGCATTGTTC ATCTTCCAGA GCAGCAACTT GAAAGTTTAA AACTAGGCCA AGACGCACAA
ATATTTGCCA ATAAGAACAC ACAAGACACT GTACATGCAA AAGTGCTGCG TATCAGCCCA
GTCGTTGATG CACAAAGCGG CACCTTTAAA GTGACACTTT CCGTTCCTAA CAGTGACTCA
AAATTAAAAG CAGGCATGTT TACCCGAGTT GAGCTGAGGT ACGACACCCA TAATAACGTG
ATCACCGTTC CCTATAACGC AGTCGTTAAT CAAGATAACG AGTTTGCTTT ATATGTTATC
GATGGCACAA ATGCCAACCG CCGCTCAGTT TCACTAGGCT ACCGTGAAGC CGATACGGTT
GAAGTGGTTT CAGGAATAGA GCCTGGTGAG CAGATAGTGA TCCGCGGTCA TCAAAACCTT
AAAGACCAGT CTCTGGTTGA GGTCATCAGC TCTCTAGACC TAGCATCAAC AAGCAAATAA
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| Protein sequence | MDSLNKRANN YFKLALPLVL VGVLSACGAE EEIKEEEKYA VPVETTTVIQ GDVSSFYSTT
ATLEAPQEAN VVTRISGLIE SINVEEGDRV TKGQLLAVID AKRQKYELAR SQAEVEIIEQ
ELNRLKKMNN KEFFSADSMA KLEYNLQAAI AKRDLAALQV EESMVRSPID GVIATRFVKA
GNMAKEFEEL FYVVDQDELY GIVHLPEQQL ESLKLGQDAQ IFANKNTQDT VHAKVLRISP
VVDAQSGTFK VTLSVPNSDS KLKAGMFTRV ELRYDTHNNV ITVPYNAVVN QDNEFALYVI
DGTNANRRSV SLGYREADTV EVVSGIEPGE QIVIRGHQNL KDQSLVEVIS SLDLASTSK
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