Gene Swoo_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1796 
Symbol 
ID6116059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2217351 
End bp2219267 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content45% 
IMG OID641633299 
Productheat shock protein 90 
Protein accessionYP_001760175 
Protein GI170726149 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.4656e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.64624e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCTCAAC AAGAAACTCA CGGCTTTCAA ACTGAAGTCA AGCAACTCCT TAACTTGATG 
ATCCACTCTC TGTATTCAAA CAAAGAGATT TTCTTGCGTG AATTGGTATC CAATGCTGCC
GATGCAGCTG ACAAGCTACG TTATGAAGCG TTAACTAACG ATGCGCTATA CGAAGGTGAC
GGTGAGCTAA GAGTTCGTAT CAGTACAGAT AAAGAGAAAG GTACCGTTAC TATTGAAGAT
AACGGTATCG GTATGACCCG CGACAGTGTT ATCGAACATT TAGGAACTAT CGCTAAGTCA
GGTACCGCAG ACTTCTTTAA AAACCTCTCT GGTGATGAGT CGAAGGATTC ACAACTGATT
GGTCAATTTG GTGTTGGTTT CTACTCATCA TTTATTGTTG CCGATAAGGT GACGGTTCGT
ACTCGCGCAG CAGGTCATAG CAGTGAAGAG GGCGTGCAGT GGGAATCAGC AGGTGAAGGT
GACTTTACTG TTGAAAATAT CGTTAAAGAG AATCGCGGAA CAGAGATCGT GCTTCACCTG
CGTGAAGAGG AGAAGGAGTT CGCCGATGAT TTCCGTCTTC GTTCAATTAT TACTAAATAC
TCAGATCATA TCTCTGTGCC TGTTGAGATG TTCGAGCCAG GTACTCCTGC TGTGGAAGCA
ACCGAAGAGC AAGAAGCGGT AGAAGCGACT GAAGGTGAGT GGAAGGCGAT GAACAAGGCG
ACGGCGCTTT GGACACGCAA CAAGAGTGAT GTTTCGAAAG AGGAGTATGA GGAGTTCTAC
AAACATATCT CCCATGACTT TACCGATCCA CTAATTTGGA GCCACAACCG TGTTGAAGGT
AAGCAGGAGT ACACCAGCTT ACTATACATA CCTTCAAAAG CACCTTGGGA TATGTGGAAC
CGTGACCGTA AACATGGTCT GAAACTGTTT GTACAACGTG TTTTTGTAAT GGATGATGCT
GAGCAGTTTA TGCCTAGCTA CCTTCGTTTT GTGCAGGGCT TGATTGACTC AAACGATCTT
CCGCTAAACG TTTCCCGTGA AATTTTACAA GACAACAAGA TCACAACCGC ATTGAGAACT
GCTGTGACTA AGCGTGTGTT GGGTATGCTT GAGAAGCTTG CAAAGAATGA TGCAGAGAAA
TACCAGTCAT TCTGGGCTGA ATTTGGTCAA GTGTTGAAAG AGGGACCTGC CGAAGACTTC
GCTAACAAAG AGCGTGTTGC TGGTCTACTG CGTTTTGCAT CGACTGATAC TGGCGAAGCG
ACAGCAAACG TATCACTGGC TGACTACATC GAGCGCATGA AAGAAGGTCA ATCTAAGATC
TACTACATTG TTGCCGACAG TCATGAGGCC GCTGCTAATA GTCCGCACCT TGAGTTACTA
CGTAAGAAGG GCATCGAAGT GCTCTTAATG TCAGAGCGTA TCGATGAATG GTTGATTAAC
CACTTAACTG AGTTTGATGG TAAGCAGCTT CACTCTGTTA CACGTGGCGA TCTTGAGCTT
GGCGATCTTG AAGATGCTAG TGAGAAAGAG GCACAAGAGA AGCTTGAGAC TGAGTCTGAA
GGTTTAGTTA AGCGCGTTAA AGACGCGTTA GGTGATAAAG TCTCTGAGGT TAAAGTGACA
ACTCGTCTAA CCGACACACC AGCTTGTGTG GTTGCCGGTG AAGGTGAGAT GTCGACACAG
ATGATCAAGT TGATGGAAGC GGCTGGTCAA TCTGTACCAG AAAGTAAGCC TAGGTTTGAG
ATCAATCCTG AGCACCCACT CGTTGCACGT TTAAACGATG AGCAAGATGA GGAGCTGTTT
GCACAATGGA GCGATCTACT GCTTCAGCAA GCGCAGCTTT CAGAAAAGGG TAGCTTGGCA
GATCCTTCAG CATTCATTAA GTTAATGAAC CAGATGCTTT TAGCTCAGTT AAAGTAA
 
Protein sequence
MSQQETHGFQ TEVKQLLNLM IHSLYSNKEI FLRELVSNAA DAADKLRYEA LTNDALYEGD 
GELRVRISTD KEKGTVTIED NGIGMTRDSV IEHLGTIAKS GTADFFKNLS GDESKDSQLI
GQFGVGFYSS FIVADKVTVR TRAAGHSSEE GVQWESAGEG DFTVENIVKE NRGTEIVLHL
REEEKEFADD FRLRSIITKY SDHISVPVEM FEPGTPAVEA TEEQEAVEAT EGEWKAMNKA
TALWTRNKSD VSKEEYEEFY KHISHDFTDP LIWSHNRVEG KQEYTSLLYI PSKAPWDMWN
RDRKHGLKLF VQRVFVMDDA EQFMPSYLRF VQGLIDSNDL PLNVSREILQ DNKITTALRT
AVTKRVLGML EKLAKNDAEK YQSFWAEFGQ VLKEGPAEDF ANKERVAGLL RFASTDTGEA
TANVSLADYI ERMKEGQSKI YYIVADSHEA AANSPHLELL RKKGIEVLLM SERIDEWLIN
HLTEFDGKQL HSVTRGDLEL GDLEDASEKE AQEKLETESE GLVKRVKDAL GDKVSEVKVT
TRLTDTPACV VAGEGEMSTQ MIKLMEAAGQ SVPESKPRFE INPEHPLVAR LNDEQDEELF
AQWSDLLLQQ AQLSEKGSLA DPSAFIKLMN QMLLAQLK