Gene Swoo_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1794 
Symbol 
ID6116057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2216224 
End bp2216553 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID641633297 
Producthypothetical protein 
Protein accessionYP_001760173 
Protein GI170726147 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.38787e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.17364e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGGAA AAGGCGGTAT GGGTAACCTG ATGAAACAGG CCCAACAGAT GCAAGACAAA 
ATGGCCAAAG TGCAGGAAGA GATCGCACGT ATGGAAGTGA CCGGTGAAGC GGGTGCTGGT
CTTGTTAAAG TCACCATGAC GGGTTCTCAC AGCGTACGTA AAGTGGATAT CGATCCAAGC
CTGTTGGAAG ATGACAAAGA GATGCTAGAA GATCTTATCG CTGCAGCTTG CAACGATGCT
GCGCGTCGTG TGGAAGAGAA CCAAAAAGAT AAAATGGCTG AAGTGACTGG TGGAATGCAA
CTGCCACCTG GCATGAAGAT GCCATTTTAA
 
Protein sequence
MFGKGGMGNL MKQAQQMQDK MAKVQEEIAR MEVTGEAGAG LVKVTMTGSH SVRKVDIDPS 
LLEDDKEMLE DLIAAACNDA ARRVEENQKD KMAEVTGGMQ LPPGMKMPF