| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1793 |
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| Symbol | |
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| ID | 6116056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2213404 |
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| End bp | 2216139 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633296 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001760172 |
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| Protein GI | 170726146 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00315607 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000397841 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTATC AGGTGTTGGC CAGAAAATGG CGCCCTGCCA CTTTTGAGCA AATGGTTGGC
CAGTCTCATG TTTTGCATGC GTTAACCAAC GCACTAACTC AGCAGAGATT ACATCATGCA
TATCTGTTTT CTGGTACACG AGGGGTGGGG AAAACAAGTT TAGCCCGACT CTTCGCAAAA
GGATTAAATT GTGAACAAGG TGTCACGGCA ACCCCGTGTG GACAATGTTC CAGTTGTGTT
GAGATCTCTG AAGGTCGCTT CGTGGATCTT ATTGAGGTGG ATGCGGCTTC AAGAACAAAA
GTCGATGACA CGCGTGAGTT ACTTGATAAT GTCCAGTACC GTCCCAGTCG AGGCCGGTTT
AAAGTCTATT TGATCGATGA AGTGCATATG CTGTCCCGCA GTAGCTTTAA TGCGCTCCTT
AAAACATTGG AAGAGCCACC TGAGCATGTA AAGTTTTTGC TAGCAACAAC GGATCCCCAG
CGTCTTCCTG TGACAGTTCT TTCGCGTTGT TTACAGTTTA ATTTAAAAAG TTTGACCCAA
GATGAGATCA TTCAACAGTT ATCCCATGTG TTGACTCAAG AGTCGCTTGT CTTTGAAAAT
CAAGCATTAA CATTATTAGC CAAAGCGGCT AATGGCAGCA TGCGAGATGC ATTGAGCTTG
ACTGACCAAG CGATCGCTTT TGGTGGCGGG GAAGTTAGAC TTAAGCAAGT GCAGACTATG
CTAGGTAGCA TTGATGAAAG GCATGTTATC ACGCTTTTTA ACGCCATAAC TCAGGGAGAT
ATTGAGCACC TTATGCAGGT GATCTCCCAA GTGCTCTCAT TTGGTGCTGA TCCTGAAGAG
GTGCTGCGTA GCTTACTTGA ACTGTTACAT CAGATAACCT TAAGTCAATT TGCCCCCGCT
GCGGCTCAGC TATCCATCTA TAGTGAGCAG ATTAGCGCAT TTGCAATACA GTTAAGCCCA
GAACAGGTGC AACTCTATTA CCAGTTACTG TTAACAGGCC GGAAAGATCT TCCCCATGCA
CCTGATCCTA AATCGGGTCT GGAGATGGCA CTACTCAGAG CGGTGTCATT TGTGCCAGAG
GTACCTGTTA AGCGTTGGAT TGTCGATAAG CCTGCCACTA TTTCAGTGCC TGATGTTAAT
GATGCTAAGC CAAGCGCTCA TGCTGTTGAG GCTACTCAAA TTTCCACGCC TTTAACTACA
AATGCAGCGA TACCACCTGC AGAGTCTCTT GATGGAATAG GTGATATTGA GTCTCCTGAG
CTCAAGCTAC AAAAGGAGAG CGAGCCTGCA ACTGAGTTTG GTAGTACATC TGATAGTGCA
GATCATAGTG CTAAGGAAAA CGTACCCGTT TTAGCTTCCG CCTCCGATGA ACCTGAAGAG
TCAGATGATC AAGATGCTGA TCTTGAGAGC TTAAACAGTG AACAAACCTT GATATTAAGT
CAGGCAGCAA GTCAGGGAAT GGAGCAAGAG AGTACAGACT CCACTGAGTT ACAAGCATCT
GTTGATGTAA AAGAAGCTGA AGTTGTCCCC GAGTCAACTC AATCGCAGTC TGAGGTTATC
CCTGAGCGAA CAGAGAGTGC TGTTGAAATA AGCAGTGAGT CATCTGACTC AGATCCTAAT
GTGGTTCCCG ATGAGTACTA TGCTCAAGCG GCTCAGTTCG ATGCTCAAAA TGAGTATCAA
GAGCAGTTTC ATGAGGATTA TTCAGACCCC TATTCAGAAG ACACTGCCGA GCAAGGTGCA
TACTCAACGC CAGAGCCAAG TGCTGAGAGT CATGAATCCC GTTCAGCTGA GATTTCAGCT
GCTGATGGTC CAGAGGAAGA TGATATTCTG GATGCTGTTT TAGCGGCGAG AGATAGTTTG
TTGACTCAAC TTAGTGCTGA TAAGCCTAAG GAGAGTGATG GAAAAAAGTC TGATCCCCAG
CGAAAAGAGT TTGTTCCGCC TAAGCGACAA GCACCGGTAG CAGAGCCTCA AGAGCCAATT
CAAAGCGAAG ATAATCAAAC TGCTCATCAA GCAGAGCACC AAGCTGATAA AAGTGATGGT
GATGAAACTG GTGAGAATGA AGTTGATGTT AACGTCGCTG ATAACGAGGA TAGGCCACCT
TGGGAGGAGC CATTAACTCC TTCTGTTGAA GAGACGTTAA GCGATGCAAC GCCTAACGTA
GAAGACCTAG AGAGTGAATC AACTCAAGCT TCTGAGCTTG AGGAATCTGT TTCTGAGCCA
GAAGATAAGA TGCTGGCAGC TGAGATTAGC TTAGCTGATG ATGGCAGTGT GAGCGGCAAT
GAGGTCGATC TTAAATGGTA TCGTTTGATG TCGGCACTGG ATGTGGGGGG ACGAGTACGC
CAACTGGCGG TTAACTCTGT TTGCCACCAT TTCATTGAAC CTCTTGCGCT CTTATTAAAA
CCTAATCAGA AGCATCTTGC TGCTGATATT GCGATAACCC AATTAGAGGA AGCGCTGGGA
AGAGCCTTAG ATAAAGAGGT TAATATTGCG GTTTCTGTGG GAAGTGACAC CACCCGTGAA
ACGCCCTTAG AGATACGTCA GCGTTTCCAT AGAGAGTTAC TGTCTCAGGC GCACCAAGGA
TTAATGAGTG ATACTCATAT TCAATGGTTG ATGGCTGAGA TGGATGCTGA GTTTGAAACG
GATAGCTTAA GCTACAGTCC AGAATTGCTC AGTTTGAAAG GAAATACCAT CGAGCTTATC
GATAAGTCGA ACTTTAAGTC GCTACCTGAG TCATAA
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| Protein sequence | MSYQVLARKW RPATFEQMVG QSHVLHALTN ALTQQRLHHA YLFSGTRGVG KTSLARLFAK
GLNCEQGVTA TPCGQCSSCV EISEGRFVDL IEVDAASRTK VDDTRELLDN VQYRPSRGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ RLPVTVLSRC LQFNLKSLTQ
DEIIQQLSHV LTQESLVFEN QALTLLAKAA NGSMRDALSL TDQAIAFGGG EVRLKQVQTM
LGSIDERHVI TLFNAITQGD IEHLMQVISQ VLSFGADPEE VLRSLLELLH QITLSQFAPA
AAQLSIYSEQ ISAFAIQLSP EQVQLYYQLL LTGRKDLPHA PDPKSGLEMA LLRAVSFVPE
VPVKRWIVDK PATISVPDVN DAKPSAHAVE ATQISTPLTT NAAIPPAESL DGIGDIESPE
LKLQKESEPA TEFGSTSDSA DHSAKENVPV LASASDEPEE SDDQDADLES LNSEQTLILS
QAASQGMEQE STDSTELQAS VDVKEAEVVP ESTQSQSEVI PERTESAVEI SSESSDSDPN
VVPDEYYAQA AQFDAQNEYQ EQFHEDYSDP YSEDTAEQGA YSTPEPSAES HESRSAEISA
ADGPEEDDIL DAVLAARDSL LTQLSADKPK ESDGKKSDPQ RKEFVPPKRQ APVAEPQEPI
QSEDNQTAHQ AEHQADKSDG DETGENEVDV NVADNEDRPP WEEPLTPSVE ETLSDATPNV
EDLESESTQA SELEESVSEP EDKMLAAEIS LADDGSVSGN EVDLKWYRLM SALDVGGRVR
QLAVNSVCHH FIEPLALLLK PNQKHLAADI AITQLEEALG RALDKEVNIA VSVGSDTTRE
TPLEIRQRFH RELLSQAHQG LMSDTHIQWL MAEMDAEFET DSLSYSPELL SLKGNTIELI
DKSNFKSLPE S
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