| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1788 |
|---|
| Symbol | |
|---|
| ID | 6116051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2210192 |
|---|
| End bp | 2211028 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641633291 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760167 |
|---|
| Protein GI | 170726141 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000100134 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAGC GTGCAAAAGT AGGACTCGGT CTTAGACGAG AGATGCTCGA TGAATTTTGT
CAGAGCTCTC CTCAGGAGAT CAATTTTTTT GAAGTCGCTC CAGAAAACTG GATGACCTTA
GGTGGAAAGT ATGGGCGGCA GTTTAAGCAG TTAACTGAGC AGCATGAATT TTTCTGTCAT
GGGTTATCCC TCTCGATTGG TGGACCTGCA GCGCTCGATG TTCAGTTTGT AAAAAATATT
AAGTCCTTCA TGGATGAGCA TAAAATCTCT GTCTATTCTG AGCATTTAAG TTATTGCTCA
GGTATCGGTC ATATGTACGA TTTAATGCCG ATCCCCTTTA CGGAGGAGGC GGTGCACTAC
GTCGCCAAAC GAGTAAAACA AGTTGAAGAT ATTTTAGAAC GCGCGCTTAT TCTCGAAAAT
GTCTCTTTTT ATACAGCGCC TGGTGCCCAG ATGTCGGAGC TTGAGTTCGT CACTGCGGTA
TTAGATGAAG CAGACTGTAA GATGCTTTTG GATGTGAATA ATATCTATGT TAATTCCATC
AATCACCAAT ATGACGCAAA AGTTTTTTTG CGAGCTATGC CAACAGAGCG GATAGAGTAC
CTCCATATAG CGGGCCATTA TGAGGAAGAT AAAGATCTGA TTGTCGATAC TCATGGCGCG
GATGTGATCT CACCAGTTTG GGAGTTGTTG GCTGAGTGCT ACCAGACTCA TGGTGTATTT
CCCACTTTGT TAGAGCGAGA CTTTAATATT CCAGAAACAC CTGTTTTGTT GGAGGAGATC
AATCAAATTG CTCAATATCA ACAGCTAGAG ATTGCGAATT TAGCTAGGAG AGCATAA
|
|---|
| Protein sequence | MDERAKVGLG LRREMLDEFC QSSPQEINFF EVAPENWMTL GGKYGRQFKQ LTEQHEFFCH
GLSLSIGGPA ALDVQFVKNI KSFMDEHKIS VYSEHLSYCS GIGHMYDLMP IPFTEEAVHY
VAKRVKQVED ILERALILEN VSFYTAPGAQ MSELEFVTAV LDEADCKMLL DVNNIYVNSI
NHQYDAKVFL RAMPTERIEY LHIAGHYEED KDLIVDTHGA DVISPVWELL AECYQTHGVF
PTLLERDFNI PETPVLLEEI NQIAQYQQLE IANLARRA
|
|---|
| |