| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1784 |
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| Symbol | |
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| ID | 6116047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2204992 |
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| End bp | 2207613 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641633287 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001760163 |
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| Protein GI | 170726137 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.942088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000219382 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACTT TGTCCTTAAC AGCAAAAGCA GTACGCAGTA GTTTTATTGT CGCTGCTGCA
TCTTCAGTTG CATTTTCCGG CTTAGCTTTT GCCGAAGAGC AGCAAGAAGG TGCAAAAGTT
GAACGCATTG AAGTGACAGG TTCTCGCATT CAACGAACTG ACATGGAGAC GGCTAGCCCT
GTTACAGTCA TTGATGCCAG TGCAATCAAG GCCGCTGGTG CAACTTCTAT TGATGAAGTA
TTGCAAAAGA TGACCGCAAC TGGTGGTGCA ATGACCAATC CAGGGATTAA CAATGGTTCT
CAGGGTAACG CCTCTATTAA CTTAAGGGGA CTAGGTTCTC AGAGAACCTT AGTTCTAGTT
AATAACCGTC GTATGGTGAA CTCTGGAACT GGCGCTGCTT CAACAGTTGA TTTGAATACT
ATTCCTGTTT CTATGATTAA ACGCATCGAA GTGCTTAAAG ATGGTGCCTC TTCCGTATAT
GGTTCAGATG CTGTAGCTGG TGTAGTAAAC ATTATTCTTA AGGATGATTT CGAAGGTTTA
GAGGCAAATG TACAAACTGG TATCTCTGGT CAGGGAGATG CAAGTGAAAC AAGCTTCGAT
CTGACCATGG GGGGAAGCTT TGAGCGCGGT AATGTTGTTA TGGGCTTACA GTACATGGAT
CGTGGTGAAG CAAGTATGGC TGACCGGGAT TCAACGCAGT GTGATTATGC TGAACGTACA
GGCGCTGATG GTAAAATTGA GCTCTACTGT GGAGGTAGCT CATATACTCC AGGTGGACAC
ATCTGGGGCC CCGATGGACG TGATTCTTTG CAAGGAAACC TTGACGGTAG CTGGCATGAA
TTTACCGATG ATGACAAGTA TAATTATAAT GCATCAAGCT ACTTATATAC ACCAATGCAA
CGCCTTAATT TAACTGCACT AGGTAACTTT GAACTCACTG ATTCGATTAA TCTGTTCAGT
GAAGCTATGT ATTCTAAACG ATGGTCTGAA CAACAGATGG CACCACAGCC AATATGGACA
GATACTTTCA CATATACAGA GGCGATGGGA GATAGCCTAT TAGAGCATGG TTATGAGTAT
GGAGATGAGT TGGACTATGG ACGTCGTATG GCGGATGTCG GAAACCGTGG TTTTTCTCAA
GTAGTTGATA CGGTTCGTGT TGTTGTAGGA CTCGATGGTT ACTTAGAGAA TGGTTGGTCT
TGGGATACCT CTGTTAACTA TGGACGTAAT GACTCAGTTG ATCGTCTAGC TAATCTTATC
AACATGGGAT CGGTTAATAC TGGCATTGAA GAGGGAACAT TTAACCCGTT AGATCAAAGC
TCTTGGTCTC AAGAGAACAT GTCTGAGTAT CTGTATACTG AGTTAAATTC TGGTGGCAGT
GAGATGTTTA TTGCATCCGC AAACCTGTCG GGCGAAGCGA TAGAGTTACC TGCAGGTTAC
TTAGGTTTTG CTACTGGTTT AGAACATAGA ACAGAAAAAG CTTGGTTTAT TCCAGACTCG
TTAACTTCTC AAGGGATGGC TAATGATCCA AAGGTCGAGC CAACGGGTGG AGAGTACGAC
GTTACTGAAG CATATTTAGA GCTAGCGATC CCACTTCTAT CTGGAATGTT TTTAGCTGAG
CAGGTCGATA TGAGTGCTGC TGTTAGGTAT TTTGATTACA GCACTTTTGG CAGTGACAGC
ACTTGGAAGC TTGGTTTAAC TTGGCGTATG ACTGATGACT TTATGCTTCG TAGTGTTGCG
TCAACAGCTT TTAGAGCACC GTCAGTCGAT GAGCTGTATT CAGGTAAATC ACCTTCGTTC
GATCAGGTTG AGCATCCTGT CGGTCAAGAT CAAGCGGAAG TCACACGAGG TGGTAACCCT
AACTTGACAC CGGAAGAGGC TGAAACCTTT ACTGCAGGTT TTGTTTATTC TCCTTCATGG
TTTGATGGTT TCTCGGTAAC TGCAGATTAT TACGATATCT CAATCACTAA CTCGATTGCT
TTGGTTGATT CACAGTACAT TGTTGATCAG TGTATGGATG CTCAAGGTAA CCCGATTAAT
ACTGGAACTA GTCTCTGTCA GTCTGCAGAT ATTAAGATGG GTGGTGGTAA TCGCATTATC
TTCAATAATC AGCTGCAAAA CATAGGTGCG GAAAACACCT CTGGTGTTGA TATTAACTTA
GCTTATGCTT TCGATGCTGC TGAGTTGGCG TGGAAAACAA GTTTGGATAC CACAATCTTA
CTTGAAAATG AATCTATTAT CTTAGGTGAG TCTATTGATT ATGCTGGACT AATCACTTCT
GGAAGTGGTG GATTTGCAAA ATATAAGACT AACTTTGATT TAGGTGTTGA GGGAGATAGT
TGGGGAGCGA GTTATCAGGC TCGATATATC TCTGGTATGG ACAGTTATGC GTGTCAAGCT
AAGCCATCAT CTTGCTATGC GCCATCGACA GACAGTATCC TCTATCATGA TATATCGGCG
ACTTACTTCC TTCCACAAGG ATGGACAATC TCAGCGGGCG TTAATAACTT ACTTGATGAA
GAAGCACCTT ATTACACAGG TAACAATGAT GCCAATACGG ATCCCTACAC CTACGATACA
TTGGGACGTT ACTTTTACTT ACAAGCGAGT GTAAAGCTAT AA
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| Protein sequence | MNTLSLTAKA VRSSFIVAAA SSVAFSGLAF AEEQQEGAKV ERIEVTGSRI QRTDMETASP
VTVIDASAIK AAGATSIDEV LQKMTATGGA MTNPGINNGS QGNASINLRG LGSQRTLVLV
NNRRMVNSGT GAASTVDLNT IPVSMIKRIE VLKDGASSVY GSDAVAGVVN IILKDDFEGL
EANVQTGISG QGDASETSFD LTMGGSFERG NVVMGLQYMD RGEASMADRD STQCDYAERT
GADGKIELYC GGSSYTPGGH IWGPDGRDSL QGNLDGSWHE FTDDDKYNYN ASSYLYTPMQ
RLNLTALGNF ELTDSINLFS EAMYSKRWSE QQMAPQPIWT DTFTYTEAMG DSLLEHGYEY
GDELDYGRRM ADVGNRGFSQ VVDTVRVVVG LDGYLENGWS WDTSVNYGRN DSVDRLANLI
NMGSVNTGIE EGTFNPLDQS SWSQENMSEY LYTELNSGGS EMFIASANLS GEAIELPAGY
LGFATGLEHR TEKAWFIPDS LTSQGMANDP KVEPTGGEYD VTEAYLELAI PLLSGMFLAE
QVDMSAAVRY FDYSTFGSDS TWKLGLTWRM TDDFMLRSVA STAFRAPSVD ELYSGKSPSF
DQVEHPVGQD QAEVTRGGNP NLTPEEAETF TAGFVYSPSW FDGFSVTADY YDISITNSIA
LVDSQYIVDQ CMDAQGNPIN TGTSLCQSAD IKMGGGNRII FNNQLQNIGA ENTSGVDINL
AYAFDAAELA WKTSLDTTIL LENESIILGE SIDYAGLITS GSGGFAKYKT NFDLGVEGDS
WGASYQARYI SGMDSYACQA KPSSCYAPST DSILYHDISA TYFLPQGWTI SAGVNNLLDE
EAPYYTGNND ANTDPYTYDT LGRYFYLQAS VKL
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