| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1776 |
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| Symbol | |
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| ID | 6116039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2198590 |
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| End bp | 2199804 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633279 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001760155 |
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| Protein GI | 170726129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.743071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000439392 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTACTT AGATTATGCT GCGACTACGC CGGTTGATCC CCGTGTTGCA
GAAAAAATGA TGCAGTGCAT GACTATGGAC GGCATCTTTG GTAACCCGGC ATCCCGTTCT
CACCGTTATG GTTGGCAAGC TGAAGAAGCT GTCGATATTG CCCGTAACCA AGTTGCTGAT
CTAATTAATG CCGATCCTCG TGAGATCGTA TTTACATCCG GTGCTACAGA GTCTGACAAC
CTAGCAATTA AAGGTGTGGC TCACTTCTAC CAGAAGAAAG GCAAGCACAT CATTACCAGT
AAGACTGAGC ACAAAGCGGT ACTCGATACT TGTCGTCAAC TTGAGCGCGA AGGTTTTGAG
GTGACTTACC TTGCACCAGA AGCTAACGGC CTTATTCCAT TGGCTACTAT TGAGTCTGCA
ATGCGTGAAG ACACTGTTCT TGTTAGCATC ATGCACGTAA ACAATGAGAT TGGCGTGATC
CACGACATTA ATGCCATTGG CGAACTTTGC CGTAGCAAGA AGATTATCTT CCATGTCGAT
GCTGCGCAAA GTGCAGGTAA GTTACCGCTT GATGTCCAGG AAACCAAAGT CGATCTACTT
TCAATTTCAG CACACAAAAT GTACGGCCCT AAGGGGATTG GTGCATTGTA TGTTCGTCGT
AAGCCACGTA TTCGTCTAGA GGCGGCTATG CACGGTGGTG GACACGAGCG TGGTATGCGT
AGTGGTACGT TAGCGACTCA CCAAATTGTT GGTATGGGAG AAGCTGCTGC AATCGCGAAA
GCTGATATGG AAGCCGATAA TGCACGCATT GCTGGGTTAC GTGACCGTCT TTGGAACGGT
GTTAAAGGCA TCGAAGAGAC TTACATTAAC GGTGATGTTG AACAACGTTA CTGCGGCAGT
CTCAATGTCA GCTTCAACTT TGTTGAAGGT GAGTCATTGA TGATGGCCCT GAAAGATCTG
GCTGTTTCAT CGGGTTCAGC TTGTACTTCC GCAAGTTTGG AACCAAGTTA TGTGCTTCGT
GCACTAGGCT TAAATGATGA GATGGCACAT AGCTCAATTC GATTCTCAAT CGGTCGTTTT
ACGACTGAAG AAGAGATCGA CCACGCAATT GAAACAATTA ATAAATCTAT TGATAGTTTG
CGGGATATGT CTCCACTTTG GGAGATGTTT AAAGATGGTG TTGACCTTGA ACAGGTTCAG
TGGGCTCACC ATTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMMQCMTMD GIFGNPASRS HRYGWQAEEA VDIARNQVAD
LINADPREIV FTSGATESDN LAIKGVAHFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLAPEANG LIPLATIESA MREDTVLVSI MHVNNEIGVI HDINAIGELC RSKKIIFHVD
AAQSAGKLPL DVQETKVDLL SISAHKMYGP KGIGALYVRR KPRIRLEAAM HGGGHERGMR
SGTLATHQIV GMGEAAAIAK ADMEADNARI AGLRDRLWNG VKGIEETYIN GDVEQRYCGS
LNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTEEEIDHAI ETINKSIDSL RDMSPLWEMF KDGVDLEQVQ WAHH
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