| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1766 |
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| Symbol | |
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| ID | 6116029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2190955 |
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| End bp | 2192631 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633269 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001760145 |
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| Protein GI | 170726119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00747728 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCATTAG TCTTACTTTT AACCCAGCAG ATGAGTCTGT ATCTGGTCAT GGTGTATCTG
GTCAGTAAAA CACCGCTATT TCAGTTTTTT TCTGAGGCTG CCACTCGCCT ACCCCATAAG
ATATTTATCT ATCTCACCTT TTCAAGTTTC TGTGTTATGG CGACCTATTT TGGTGAGCAC
ACAAATGATG CACTCGCCAA TACCCGAGCT ATGGGCGCCG TACTCGGCGG TTTGCTTGGC
GGGCCTGTCA CTGGCTTTTT AGTTGGATTA ACTGGTGGGC TTCACAGATA CAGTATGGGG
GGCTTTACCG ATCTTGCCTG CGCGATCTCC ACCACACTTG AGGGATTATC AGCAGGAATT
ATCAGTTTGT ACCTCAGAAA ACAGGGGAAA AGTGAGCTTA TCTACGCCCC TTTGTTGGTG
TGTTTAGTCA CTTTTTCTGC TGAGATGTTG CAGATGGGCG TAATACTGCT CGTCGCTCAG
CCGTTTGGAG ATGCTTGGTC TCTGGTTAAA CAGATAGCCC TACCTATGCT GCTGGTTAAC
TCGATCGGTG CAGCACTCTT TATGAGCATG GTTCGGGATC AAAAAACCAT GTTCGATAAG
ATGTCATCGG TATTTTCAAC CAAAGCACTA AAAATTGCTG AACGCAGTGT CGGTGTGCTC
TCCAAGGGGT TCGATCAAAA AAGCAGTGCT AAAGTTGCCA AAATTATACT TGAGGAGACT
AATGTTGGCG CCGTTGCGAT CACAGATACC GAAAAACTGT TAGCATTTAT TGGCGCTGGT
GCTGATCACC ACATTCCAGG TACCCCTATC TCATCTCAAA TCACTCAAGA TGCAATAGAT
AACAACTGTG TCATGTTTGC CGATGGTGTC GATGTTGCTT ATGCCTGCTC TATCTCTTCC
CAATGTGGAT TAGGCTCAAG CTTAGTTATC CCGCTTCGCA GTGAGACTCA AGTGATAGGT
ACGATTAAAC TCTATGAGCC TAAAAATAAG CTTTTTCTCA ATATTAATCG CACCCTAGGC
GAAGGCATTG GACGATTACT ATCCAACCAA ATCCTATTTG GCCGATTCGA GCAGCAGCAA
AACTTGTTAA CTCAGGCTGA GCTAAAACTG TTGCAAGCTC AAGTCAATCC ACACTTTCTG
TTTAATGCAC TAAACACGAT AGCTGCGATT ATAAAAAGAG ACCCACTCAA GGCAAGAAAG
CTTATCCAGC AACTAGCTCA GTTTCTGCGA ATCAATTTAA AGCGCACCAC AGGCTTAGTG
ACACTTGAAG ATGAGCTGGA ACATATCGAG TCCTATTTAA CCATAGAGAA AGCCCGCTTT
ATCGATAAGT TAGAGGTAAA CATTCATATT GATGAATCAC TGCGTCATTA CCGGCTTCCC
GCTTTTACTC TGCAGCCTAT TATTGAAAAC GCTGTAAAAC ATGGTACATC ACACATGTTA
GATAAAGGGA TTATCCAAGT TACCGCCAGC ATCACCGATG AACTGTTGCT ATTGGAAGTT
ACCGATAATG CAGGCTTATA TCAGCTAAAA GAAAATTCAG AGGGGCTAGG TATGAATCTG
GTACATAAAC GGCTTCAAAA TCAGTTTGGC TCTGAATATG GCCTTAAAGT TGACTCTGAA
CCGGATAGTT ACACTAAAGT AAGTATTCAA TTACCCTACT CTGGAGCCAC ACAGTGA
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| Protein sequence | MSLVLLLTQQ MSLYLVMVYL VSKTPLFQFF SEAATRLPHK IFIYLTFSSF CVMATYFGEH
TNDALANTRA MGAVLGGLLG GPVTGFLVGL TGGLHRYSMG GFTDLACAIS TTLEGLSAGI
ISLYLRKQGK SELIYAPLLV CLVTFSAEML QMGVILLVAQ PFGDAWSLVK QIALPMLLVN
SIGAALFMSM VRDQKTMFDK MSSVFSTKAL KIAERSVGVL SKGFDQKSSA KVAKIILEET
NVGAVAITDT EKLLAFIGAG ADHHIPGTPI SSQITQDAID NNCVMFADGV DVAYACSISS
QCGLGSSLVI PLRSETQVIG TIKLYEPKNK LFLNINRTLG EGIGRLLSNQ ILFGRFEQQQ
NLLTQAELKL LQAQVNPHFL FNALNTIAAI IKRDPLKARK LIQQLAQFLR INLKRTTGLV
TLEDELEHIE SYLTIEKARF IDKLEVNIHI DESLRHYRLP AFTLQPIIEN AVKHGTSHML
DKGIIQVTAS ITDELLLLEV TDNAGLYQLK ENSEGLGMNL VHKRLQNQFG SEYGLKVDSE
PDSYTKVSIQ LPYSGATQ
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