Gene Swoo_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1757 
SymbolyajC 
ID6116020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2182576 
End bp2182908 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content42% 
IMG OID641633260 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001760136 
Protein GI170726110 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.15206e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00353276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGATTT CAAATGCATA CGCTGCCGAT GCTCCTGTAT CTGGCGCAGG TGGTACCATG 
GAACTTGTTT TCATGCTGGT TATATTCGGC CTGATCTTTT ATTTCATGAT TTTCCGTCCA
CAATCTAAGC GCGTTAAAGA GCATAAGAGC CTAATGAGCT CATTAGGTAA AGGGGATGAA
GTCCTGACCA GCGGTGGCAT ACTGGGTAAG ATCGCTAAAA TCAGCGATGA AAATGACTAC
GTGTTGTTGT CTCTGAACGA AACAACTGAA ATTACAATCA AGAAGGATTA CATTGCGGCT
GTATTGCCTA AAGGCTCTAT TAAGTCACTT TAA
 
Protein sequence
MLISNAYAAD APVSGAGGTM ELVFMLVIFG LIFYFMIFRP QSKRVKEHKS LMSSLGKGDE 
VLTSGGILGK IAKISDENDY VLLSLNETTE ITIKKDYIAA VLPKGSIKSL