| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1756 |
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| Symbol | |
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| ID | 6116019 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2181413 |
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| End bp | 2182545 |
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| Gene Length | 1133 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 642486007 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000138862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00517032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGATAC AACCGATGGC CGCGCACGTC GCGGACGTTT GGTGTTTGAT
CGTGGCACAG TAGAGACACC TGCATTTATG CCTGTGGGCA CCTACGGCAC AGTAAAAGGG
ATGACTCCGG AAGAGGTGCG TGAAACGGGC GCTGATATTC TGCTTGGTAA CACTTTCCAC
CTATGGCTTC GCCCTGGTGA AGAGATCATG CGTAAGCATG GTGACCTGCA TGACTTTATG
AATTGGCAGC GTCCAATTCT TACCGATTCT GGCGGATTTC AGGTGTTTAG CTTAGGCGAT
ATCCGAAAGA TAACTGAAGA GGGAGTACAT TTCCGTTCAC CGATTAATGG TGAAAAGATC
TTCCTTGATC CTGAGAAATC TATTCAGATC CAAAACTCAT TAGGCAGTGA TGTCGTGATG
ATTTTTGATG AGTGTACGCC CTACCCAGCG ACTGAAGATG AAGCACGTAA GTCGATGCAG
ATGTCACTGC GATGGGCACA ACGTTCACGT GATGAGTTTG ACCGACTCGA AAATCCAAAT
TCGCTCTTTG GTATTATCCA AGGTGGCGTA TATGAAGATC TTCGTGATGA GAGCCTAAAA
GGGCTAGTTA ATATTGGTTT CGACGGTTAT GCCGTTGGTG GTTTGGCAGT GGGTGAGCCT
AAAGAAGATA TGCATCGCAT TCTTGAGCAT GTATGTCCTC AAATCCCAGC TGACAAGCCA
AGATACTTGA TGGGGGTCGG TAAGCCAGAA GATTTAGTTG AGGGTGTTAG ACGTGGTGTA
GACATGTTCG ATTGTGTTAT GCCAACTCGA AATGCGCGCA ACGGTCATCT GTTTACCAGT
GAAGGTGTTA TTAAGATACG CAATGCGCGT CATCGTGATG ATACTTCCAC ACTCGATGAT
AAGTGTGATT GTTATACCTG TAAGAACTAT TCACGGGCGT ACCTTTACCA CTTAGATCGT
TGTAACGAAA TTTTAGGTGC TCGTTTAACA CCATTCACAA CCTTAGATAT TACCAAAGAT
TGATGGAAGG TTTGCGCGGT GCTATCGAGA CAGGTACATT AGAGGCCTTT GTTGAGGACT
TCTATACCAG TCAAGGTCGC GAAGTACCTG AAGTTCCAGA ATTAATCGAT TAA
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| Protein sequence | |
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