| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1731 |
|---|
| Symbol | |
|---|
| ID | 6115994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2154918 |
|---|
| End bp | 2155727 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641633235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760111 |
|---|
| Protein GI | 170726085 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4336] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.22733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAC CAGTAAATAA TAATTTTAAA GAGTCATTGC TACGGACTGT GGAGTCTCTT
AGGAAGAGCA TACGTTCTGG CGAGATGGAT GATAGTACAA GCGGTTTAGT GCCAGGTTTA
GTTCAAGCAA ATATAGTCAT TTTACCTAAA ATATGGGCAC ATGATTTCTT ACTTTTTTGC
CAAAAAAATC CTATAGCATG TCCACTTATT GACGTTTTCG ATGCTGGACA GTTTCTATTA
AATAGCCTAG GGAAAGATAT TGATGTTCGT ACAGACATTC CTGAGTATTG TGTTTTTGTT
GGTGGAGTTA AAACTGAAGT AAAAAAAGAC ATATCAGATT TGTGGCAAGA TGATTTTGTT
GTTTTTGCAT TAGGATGTTC TTTTAGTTTC GAGTATGCGT TGCAGCAAGC AGGGTTATCT
ATCGCAAACT TAGAGTCTAA TAGTAATGTT TCAATGTACG AAACTAATGT TCCAACCAAA
AGTGTTGGAG TGTTCCAAGG TAATGTCGTT GTATCCATGA GACCGTTTAC CCCTGCTCAG
GCCATAAAAG CTATTCAGAT AACAAGTCAA TTTCCTCTGG CACATGGCGC TCCTATCCAT
ATTGGAAAGC CTGAGATGAT AGGCATTAAT TCTTTAAGTA ATCCATCTTT TGGTGACTCT
GTTGAAATAA ATGAAGATCA TATTCCAGTA TTTTGGGGAT GTGGCGTTAC GCCTCAAGTA
GTTATTAGTA ACGCAAAAAT ACCAATGTTC ATAACGCATG CTCCAGGGAA AATGTTAATT
ACAGATAAGC TATATTCTGA ATTGCGTTAA
|
|---|
| Protein sequence | MQKPVNNNFK ESLLRTVESL RKSIRSGEMD DSTSGLVPGL VQANIVILPK IWAHDFLLFC
QKNPIACPLI DVFDAGQFLL NSLGKDIDVR TDIPEYCVFV GGVKTEVKKD ISDLWQDDFV
VFALGCSFSF EYALQQAGLS IANLESNSNV SMYETNVPTK SVGVFQGNVV VSMRPFTPAQ
AIKAIQITSQ FPLAHGAPIH IGKPEMIGIN SLSNPSFGDS VEINEDHIPV FWGCGVTPQV
VISNAKIPMF ITHAPGKMLI TDKLYSELR
|
|---|
| |