| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1717 |
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| Symbol | |
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| ID | 6115958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2132752 |
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| End bp | 2134290 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633199 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001760097 |
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| Protein GI | 170726071 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0924864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0289301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTGG AAGTATGTTG TTTGGACCGA GTGGGTCTAG CTAAAGATAT TTTAATGATT
TTAGAAGGTT ATGGCATTAA CCTACTCGCC ATTGATGCCA GTAATCAAGG GTTTCTCTAT
CTACAGTTTG CAGAAGTAAA CTTTGATACC CTCAGTGAAC TACTGCCTTT GATCCGAAAA
GTTGAGGGGG TACATGATGT CCGTACAGTC TCTTTTATGC CATCAGAGCA GGAGCACTAT
GCGTTAAAAA CCTTGCTGAA AACCTTGCCC GATTCTGTTT TCTCTATCGA TGTGAAGGGA
AGAGTTCGGA TCGTGAATGA GTCGGCTATT ATGACCATTG GCATGCAAGA GCATGAGATC
TTGGATGAGT CCCTCAACCA TTGGGTACAA GGGTTTAATT TTAGCCGTTG GTTAAGTGAA
AGCTTAGTAT TGGCTCAGGC GACACGAGTC AATATTGGTC AGAATGAATA TCTGGCAGAG
ATGCTCCCAA TTTACCTGCC TGATGAGAAT GATAAATCGA TTCTTGCGGG CGCCGTTGTA
TCACTTAAAT CACCAGCTAG AGTGGGCAAG CAATTCAATG CGCTACAGAA TCAAACTGTT
GGTTTTGAGA ATGTACTGGC GACCAGCGAT AAGATGAAAG AGGTGCTTGT ACAGGCACGC
CGAATGGCTC AACTTGATGC GCCACTGCTA ATCACAGGAG AAACAGGTAC GGGTAAAGAG
CTAATGGCAC GAGCGTGTCA TGATGCCAGT ATGCGCAGAG AGTATCCGTT TATCGCGATA
AACTGTGCAG CCTTGCCAGA TAGCGCCGCT GAGGAGGAGC TATTTGGTTA TGTGAGAAAC
GGTGAGGTGA TTAAGCGAGG CTTCTTTGAA GAGGGTAAAG GCGGCACGGT TTTTCTCGAT
GAGATAGCTG AAATGTCTAA ATCTGCTCAA GTTAAGCTAT TGCGTCTGTT ACAAGATGGA
ACGTTCAGAC GTTTGGGTGA AGATCAGGAG GTGAGAGCAG ATGTTAGAAT AATCTGTTCT
ACCCAGAAGA ACTTGGCAGA GCTGTGTCAG ACAGGTGATT TTAGAGAAGA TCTTTATTAC
CGTATCCATG TATTGAGTTT CCACCTTCCA TCGCTTCGTG AACGTAAGAT TGATGTTATC
CCGCTGACTG AGATGTTCCT TGAGCACTAT AGCCAGCAAC TTTCAATCCC TATTCGCCGG
ATCTCTGCTC AGTGCCGTGA GCACTTACTC AATTACGCTT GGCCAGGTAA TGTTAGACAA
CTTAAAAATG CTATTTTTAG GGCAGTGTCT ATGTGGGATG GCTCTGCTGA GCTTACGGTT
GAGCAGTTGA AACTGCCTTC ATATGCTGAG GGTTTCGGTT ATTTTGATCA TCAATTTGAG
GGAAGCCTAG ATCAGGCTAT GAAGCAATTT GAGGCCAGTC TGCTTAGAAG GCTCTATCCT
GCCTACCCAA GTACTAGACA GTTAGCGAAG AAGTTAGGTG TGTCGCACAC TGCGATAGCG
AACAAGTTAA GAGAGTATAA GATCAGTAAA CAGAAGTAG
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| Protein sequence | MRLEVCCLDR VGLAKDILMI LEGYGINLLA IDASNQGFLY LQFAEVNFDT LSELLPLIRK
VEGVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKG RVRIVNESAI MTIGMQEHEI
LDESLNHWVQ GFNFSRWLSE SLVLAQATRV NIGQNEYLAE MLPIYLPDEN DKSILAGAVV
SLKSPARVGK QFNALQNQTV GFENVLATSD KMKEVLVQAR RMAQLDAPLL ITGETGTGKE
LMARACHDAS MRREYPFIAI NCAALPDSAA EEELFGYVRN GEVIKRGFFE EGKGGTVFLD
EIAEMSKSAQ VKLLRLLQDG TFRRLGEDQE VRADVRIICS TQKNLAELCQ TGDFREDLYY
RIHVLSFHLP SLRERKIDVI PLTEMFLEHY SQQLSIPIRR ISAQCREHLL NYAWPGNVRQ
LKNAIFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDHQFE GSLDQAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKISK QK
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