| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1689 |
|---|
| Symbol | |
|---|
| ID | 6115930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2098645 |
|---|
| End bp | 2099313 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633171 |
|---|
| Product | adenylyl-sulfate kinase |
|---|
| Protein accession | YP_001760069 |
|---|
| Protein GI | 170726043 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases |
|---|
| TIGRFAM ID | [TIGR00455] adenylylsulfate kinase (apsK) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.664653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTT TTATGTCATC ATTATCTAAA ACTAGCGCGT CACCTTATCA GGAAATAGAG
GTTGAAGATA AATCCTCCGA TGTTGTCTGG CACAATGCAA GTGTGAGCCA TGAGCAAAGA
GTTGCGGCGC AGGGGCACAA GCCTGCTGTA CTTTGGTTTA CGGGGCTGAG TGGCTCGGGT
AAGTCTACAG TGGCTAATGC TGTGGATAAA TTACTCTATG ATTTAGGGTG TAAGACCTAT
CTGCTTGATG GTGATAATGT TCGTCATGGG CTTAATGGCG ATTTAGGTTT CTCAGATAAA
GATCGAGTTG AGAATATTCG CCGTATCGGT GAGGTATCAA AACTGTTTGT TGATGCTGGG
TTACTTGTAT CGACCGCTTT TATCTCTCCC TTTATTGCGG ATCGTGACTT GGTTAGAAAG
CAGCTAGCTG ATAAGCAGTT TATTGAGGTG TTTATCGACA CGCCGCTTGA GGTGTGTGAA
GAGCGAGATC CCAAAGGGCT TTATAAAAAA GCACGGGCAG GGGAGATTAA AAACTTTACT
GGCATCGATT CAGCTTATGA GCTGCCTAAG TTGCCTGAGA TCCATGTGAA GACGGCTGAA
AAGTCCATCA AAGCATGTGC AGAGCAAGTG GTTAATTATC TTATCGTGAA CGGGTATATT
AACTCGTAG
|
|---|
| Protein sequence | MDIFMSSLSK TSASPYQEIE VEDKSSDVVW HNASVSHEQR VAAQGHKPAV LWFTGLSGSG
KSTVANAVDK LLYDLGCKTY LLDGDNVRHG LNGDLGFSDK DRVENIRRIG EVSKLFVDAG
LLVSTAFISP FIADRDLVRK QLADKQFIEV FIDTPLEVCE ERDPKGLYKK ARAGEIKNFT
GIDSAYELPK LPEIHVKTAE KSIKACAEQV VNYLIVNGYI NS
|
|---|
| |