Gene Swoo_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1643 
Symbol 
ID6115884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2034703 
End bp2035188 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID641633126 
ProductCheW protein 
Protein accessionYP_001760024 
Protein GI170725998 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CAAATCAAGT AGCGGTAAGT AAAGACGACG AAGTGTTGCA ATGGGTAACC 
TTTAGGCTCG ACAATGAAAC CTATGGCATC AATGTCATGC AGGTTCAAGA AGTGCTAAGG
TATACCGAAA TCGCTCCGGT ACCAGGTGCT CCTCACTATG TGTTGGGGAT CATTAATCTG
CGAGGCAATG TGGTTACAGT GATCGATACG AGATCACGTT TTGGTTTGGC ATCTTCGGAG
CTGGATGATT CTACTCGAAT CGTGATTATC GAAGCTGAGA AGCAAGTGAT CGGCATTTTG
GTTGATAGTG TTGCTGAAGT CGTTTACTTA CGTGGCTCTG AGATTGACAA TGCGCCAAAT
GTCGGTACTG AAGAGAGTGC TAAATTTATT CAAGGCGTTA GCAATAGAGA TAATGAGTTA
TTAATTCTCG TTGATCTGGA TAAATTACTG TCTGATGAAG AGTGGATGGA GTTAACACAA
GTCTAA
 
Protein sequence
MTDANQVAVS KDDEVLQWVT FRLDNETYGI NVMQVQEVLR YTEIAPVPGA PHYVLGIINL 
RGNVVTVIDT RSRFGLASSE LDDSTRIVII EAEKQVIGIL VDSVAEVVYL RGSEIDNAPN
VGTEESAKFI QGVSNRDNEL LILVDLDKLL SDEEWMELTQ V