| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1635 |
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| Symbol | fliA |
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| ID | 6115876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2027002 |
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| End bp | 2027730 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633118 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001760016 |
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| Protein GI | 170725990 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAAAA CCGCTGCGTA TACTTGTTTA GATAATAAAG CTTCAATCGT TGAACAGTAT
GCTCCATTGG TTAAAAAGAT TGCTCACCAT CTTTTAGCAC GCTTACCAGC GTCAGTTCAA
ATTGATGACC TGTTACAGGC TGGAATGATG GGTTTGCTCG AAGCTTCTAC GAATTTTGAT
GGCAGTAAAG GCGCAAAGTT CGAAACCTTT GCTGGAATAC GGATCCGTGG CTCTATGCTT
GATGAGATAC GCCGTGGGGA CTGGGTTCCA AGGTCGGTAC ATCGAAACCA GAGACGTGTT
GCTCAAGTTA TCGATGAGTT AGAACAAGAG CTTGGAAGAG ATGCAAAAGA CACTGAAATT
GCTCAAAGAC TTGATATATC GCTAAATGAG TACCACCATA TTCTTAATGA TGTTTCAGTT
GGAAAGGTGG TTGGAATTGA AGATTTAGGT GTGTCACTTG ATGTTGTAGG TCAAGCAGAG
GAGCGAAAGG ATGACACTTT TGAATCGATT GCAGATGTTG AGTTTCATAC AGCCTTGGTT
GAAGCGATCA AGCTTCTACC AGAAAGAGAT GGATTAGTTT TATCGCTTTA TTATGATGAA
GCGTTAAATT TAAAAGAAAT TGGGTCCATT CTTGAAGTTA GTGAGTCCCG AGTTAGCCAG
ATACTAAGTC AGGCAATGCT CAGACTAAAA GCTAAACTTA AGCATTGGAC AAATAATAAG
ATCACGTAA
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| Protein sequence | MSKTAAYTCL DNKASIVEQY APLVKKIAHH LLARLPASVQ IDDLLQAGMM GLLEASTNFD
GSKGAKFETF AGIRIRGSML DEIRRGDWVP RSVHRNQRRV AQVIDELEQE LGRDAKDTEI
AQRLDISLNE YHHILNDVSV GKVVGIEDLG VSLDVVGQAE ERKDDTFESI ADVEFHTALV
EAIKLLPERD GLVLSLYYDE ALNLKEIGSI LEVSESRVSQ ILSQAMLRLK AKLKHWTNNK
IT
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