Gene Swoo_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1631 
SymbolflhB 
ID6115872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2021296 
End bp2022429 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID641633114 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001760012 
Protein GI170725986 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA ACGACAGTAG CCAAGAGAAA ACCGAAGAGG CAACTCCCAG GCGCAGGGAG 
CAAGCGCGAG AAAAAGGTCA GGTTGCCCGT TCAAAAGAGT TAGGTACCTC AGCGGTTCTC
CTCGCTTCAG CTGTTGGTTT TGTCATGGCA GGTCCAGGCA TTGCAAAAGC ATTAGCGTCA
ATTATGACGA ATCTATTTAC CATTGATAGA GCGCAAGTAT TTGATACAAA TGAGATGTTC
CTTATATGGA AGTTTATTGG GCTTGAATTA GCATTCCCTA TCTTAAGTTT GATAGCCTTT
CTAGCGGTAG TATCATTTAT TGGTAACATT GTCCTCGGTG GGATCACTTT TTCGGTCAAA
GCATTTATGC CTAAACCTGA TAAAATGAGC CCTGTCAAGG GGTTTAAGAG AATGTTTGGT
GTACAGGCCT TGGTTGAATT AACTAAAGGT ATTGCTAAGT TTTCGGTCGT TGCCTTAGCG
GCTTACTTTC TGCTCAGCTT CTATTTCGAT GATATTCTAG CGCTCTCTCG TGAGCACCTT
CCTGGTAATG TTTATCACTC TTTAGATTTA CTTGCATGGA TGTTTATACT GCTCTGCTCC
TCAACCTTGC TCATTGTGGT TATCGATGTT CCATTTCAGA TCTGGAATCA CAATAAGCAG
CTTAAAATGA CCAAACAGGA GATTAAAGAT GAGTACAAAG ACACCGAAGG GAAACCTGAA
GTTAAAGGAA AAGTAAGACA GATGCAGAGG GAGATGGCGC AAAGGCGAAT GATGAGTGAA
GTGCCGAACG CCGATGTTAT CGTGGTCAAC CCGGAGCATT ACGCTGTGGC AGTAAAATAT
GATGTAATGA AGTCTACTGC CCCTTATGTG TTAGCCAAAG GGGTTGATGA TGTCGCATTT
AAAATTAGAG AGATAGCAAG AGAACATGAG ATTGCTATTG TATCTGCTCC CCCTTTAGCC
CGTGCGATTT ACCATACGAC GAAAATAGAG CAAGAGATCC CTGAAGGGTT ATTTACTGCT
GTGGCTCAGG TGTTAGCCTA TGTATTTCAG CTTCGCCAAT ATCAACAAAA GGGTGGCAGA
AAGCCGACTC CCATTCCCGT CAACCAGCCC ATTCCTGATG AGTTAAAACA TTAA
 
Protein sequence
MAENDSSQEK TEEATPRRRE QAREKGQVAR SKELGTSAVL LASAVGFVMA GPGIAKALAS 
IMTNLFTIDR AQVFDTNEMF LIWKFIGLEL AFPILSLIAF LAVVSFIGNI VLGGITFSVK
AFMPKPDKMS PVKGFKRMFG VQALVELTKG IAKFSVVALA AYFLLSFYFD DILALSREHL
PGNVYHSLDL LAWMFILLCS STLLIVVIDV PFQIWNHNKQ LKMTKQEIKD EYKDTEGKPE
VKGKVRQMQR EMAQRRMMSE VPNADVIVVN PEHYAVAVKY DVMKSTAPYV LAKGVDDVAF
KIREIAREHE IAIVSAPPLA RAIYHTTKIE QEIPEGLFTA VAQVLAYVFQ LRQYQQKGGR
KPTPIPVNQP IPDELKH