Gene Swoo_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1629 
Symbol 
ID6115870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2020149 
End bp2020418 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content39% 
IMG OID641633112 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_001760010 
Protein GI170725984 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAG AATCACTGGT TGATATTTTC CGTGAAGCCT TATCTGTCAT CGTTACTATT 
GTTTCGTTGA TCATCTTACC TGGCCTAGTT ATTGGTCTTA TTGTGGCGGT TTTTCAGGCT
GCAACCTCTA TTAACGAACA AACATTAAGT TTTTTACCTC GTCTATTAAC GACACTATTT
GCGCTTATGT TTCTGGGACA TACATTGATT CAAACTATGA TGGAGTTCTT CTTTGAAATG
GTGAATATGA TCCCGCAGGT GATTGGCTAA
 
Protein sequence
MSPESLVDIF REALSVIVTI VSLIILPGLV IGLIVAVFQA ATSINEQTLS FLPRLLTTLF 
ALMFLGHTLI QTMMEFFFEM VNMIPQVIG