| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1607 |
|---|
| Symbol | flgL |
|---|
| ID | 6115848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1998387 |
|---|
| End bp | 1999577 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641633090 |
|---|
| Product | flagellar hook-associated protein FlgL |
|---|
| Protein accession | YP_001759988 |
|---|
| Protein GI | 170725962 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.756895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTT CTACTTCGCA GATGTTTAAT CAAAGCATCA ACAGTGTTCT GGATAAACAG
ACTGCTACTA GCAAAATATT AGATCAACTA TCGAGTGGCA AGAAGGTCAA TACTGCGGGT
GATGATCCAG TAGCATCAGT AGGCATTGAT AATTTAAATC AACAAAATGC CCTTGTTGAT
CAGTTTATGA AGAATATTGA CTATGCCAAA AACCGCCTTG GTTTGAGTGA AAGTAAGCTT
GGCACGGCTG AAACGTTAGT TGCTTCAACG CGAGAGCAAG TGATCCGTGC AATAAATGGT
GGCCTGTCAG AGTCTGAGCG GCAAATGATT GCCGATGAGC TTAAAGGAAC GTTAGAGGAA
CTCGTTGCGG TTGCAAATAC TAAGGATGAA TCGGGCAACT ATATCTTCGC AGGCTTTGAA
ACTGGTAAGC AGCCTTTTGC CTTTGATAGT GCTGGAAACA TGATATATAG CGGTGATAAC
GGAGCGCGAG AAGCGGTTAT CGCCTCGGGT GTTACGATTG CCACTAATAT CCCTGGTGAC
AACGCTTTTA TGAATGCTCC TAGTGGCTTA GGTGATTACA GCGCCAATTA TCTGGCGAGT
CAAGTTGGTG AGTTCTCTGT TGATAGTGCC AAAATAACGA ACCCTGGTAC ATATGTTGAA
GATACCTACA CTTTTACTAT GGTGGGAGCG AATCTTGAGG TTAGAGATTC AAGTGCCACA
TTAGTGACAA CAGAGGTCGG TTTTGATCCC ACTAACCCTA TCTCTTTTAA CGGGATGGAG
GTCAAGCTAG ACGGTATGCC TACTGCAGGC GACAGCTTCT CAATTACTCC TCAGTCAGAG
GTCAGTATTT TCGACACAAT TAATCAAGCA ATTTCTCTAC TCGAAGATCC TAATAAGGTG
AACACCCCAC AAGGTGTTTC TGAATTGGCA CAGATATTGA ATAATATTGA TAGTGGTGTC
AATCAAATCA GTATTGCTCG AAGTGAAACA GGCAACAGCC TTAAAAGCAT CGAAAGCTAC
AGTACTCACC ATGTAGATGA GAAGTTAGTG AATAGTTCAA CTCTATCTAT GTTGGAAGAT
CTTGATTATG CATCGGCAAT TACAGAGTTT GAGAAGCAGC AGTTAGCATT AAATGCGGTT
TCAAGTGTAT TTAGCAAGGT AGGGTCTGTT TCACTGTTCG ATTACATATA G
|
|---|
| Protein sequence | MRISTSQMFN QSINSVLDKQ TATSKILDQL SSGKKVNTAG DDPVASVGID NLNQQNALVD
QFMKNIDYAK NRLGLSESKL GTAETLVAST REQVIRAING GLSESERQMI ADELKGTLEE
LVAVANTKDE SGNYIFAGFE TGKQPFAFDS AGNMIYSGDN GAREAVIASG VTIATNIPGD
NAFMNAPSGL GDYSANYLAS QVGEFSVDSA KITNPGTYVE DTYTFTMVGA NLEVRDSSAT
LVTTEVGFDP TNPISFNGME VKLDGMPTAG DSFSITPQSE VSIFDTINQA ISLLEDPNKV
NTPQGVSELA QILNNIDSGV NQISIARSET GNSLKSIESY STHHVDEKLV NSSTLSMLED
LDYASAITEF EKQQLALNAV SSVFSKVGSV SLFDYI
|
|---|
| |