| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1595 |
|---|
| Symbol | |
|---|
| ID | 6115836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 1986395 |
|---|
| End bp | 1987318 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641633078 |
|---|
| Product | response regulator receiver modulated CheW protein |
|---|
| Protein accession | YP_001759976 |
|---|
| Protein GI | 170725950 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGTA TTCTTGAGTC AGTTAACAAA CGAACCCAGC TAGTTGGGGC GAACCGTTTA
GAGCTTTTAC TTTTTAAGCT TAACGGCCGT CAAAGGTTCG GAATCAACGT GTTCAAAGTT
AAGGAGGTAC TACAATGCCC ACCCTTAACC AGTTTGCCTA AATTAAGTTC CTTTGTTAAA
GGGGTTGCAC ACATTCGTGG TGCGACGATA TCTGTGATTG ATCTCAGTGC GGCAACAGGT
GGCCGTCCAA TTGAGGATAT CGACGGTTGT TTTATCATTA TTTCTGAATA CAACCGAAGT
ATTCAGGGAT TTTTGGTAAA GTCAGTAGAG CGGATAATTA ATATGAATTG GGAGGCGATT
ATGCCGCCTC CACAGGGGTC TGGACGCTAC TCTTATCTGA CTGCTGTGAC TGAGATAGAG
GGTGAGTTAG TTGAGATCCT TGATGTCGAG AAAATTCTTG ATGAGATATC TCCAGTTAAA
ACTGAAATTA GCCAAGAGTT AAGTGAGCAG CTAACCATAG ATGAAGATGA TAATTTTCAT
ATCATGGTTA TCGATGATTC TGCAGTGGCA AGAAAGCAGA TCATTCGTGC TCTTGAAGCA
TTGGGATTGC AGATCGATAC GGCCATTGAC GGTAAAGATG CATTAAATAA ACTCACCAAA
ATGGCTGAAG AGATGGATAA TGTCTCCAAG GAGATCCCGC TTATTATCTC AGATATCGAA
ATGCCAGAGA TGGACGGCTA TACGCTAACA GCAGAGATTA GAGATAATCC AAAGCTGAAA
GATATTAAAA TTGTGCTGCA CACCTCCTTA AGTGGAGTAT TTAATCAGGC CATGGTGGAG
AAAGTTGGGG CGAATGACTT TATTGCTAAA TTTAATCCCG ATGAGCTTGC TGCGGCAGTG
AATAAGCATT TGAGTCTAGA ATGA
|
|---|
| Protein sequence | MSSILESVNK RTQLVGANRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT SLPKLSSFVK
GVAHIRGATI SVIDLSAATG GRPIEDIDGC FIIISEYNRS IQGFLVKSVE RIINMNWEAI
MPPPQGSGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TEISQELSEQ LTIDEDDNFH
IMVIDDSAVA RKQIIRALEA LGLQIDTAID GKDALNKLTK MAEEMDNVSK EIPLIISDIE
MPEMDGYTLT AEIRDNPKLK DIKIVLHTSL SGVFNQAMVE KVGANDFIAK FNPDELAAAV
NKHLSLE
|
|---|
| |