Gene Swoo_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1572 
Symbol 
ID6115812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1962898 
End bp1963815 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content45% 
IMG OID641633054 
Producthypothetical protein 
Protein accessionYP_001759953 
Protein GI170725927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATG GGTCTATCAA TATTTGCCTG AAAAGAGCAA TCGTCGTTTC ACTGCTCTCA 
TCTGTGGTTT ATCTACCCAG TGTGTCAGCG TCAGGTAAAC CCTCTTTCTC CCCTTTTAGT
GTCTCAGTTT CCCGTATTGA TACGGCTGAA GCGGATATCG GAGAGGGGCA AAATACCCTA
CAAAGAAGTT CATGGTTGTT TGATGCTAAC GCTAAACTCC CTTTAAATAA GCAGTGGTCA
CTTGGATTCA ATTTAGGGTA TGGCGACCTA AATTACGACT GGAAGCAAGA TGGCAGCTCG
ATTTTAAATC GCCAACTTCA GGGCTGGCAG CAGGTACACA GGTATAGCGC TGGCGTCTCA
TTAAGCTACC GTTTGAATAA GCACTGGATG TTTATGGTGG CGCCTAAACT GCAATACGCT
TACGCTGACA CAGCTAAATC AAGTAACGCC TCTAGTTATG GTGTTGTTGC CTCGGGGATG
TACCGATTTG GTAATGGTAA CTTGCTTGGA TTAGGAGTGG CGTATTTAAA TGATATCTCG
GAAGTTAGAA CGGTACCTTT CTTGGCGGTT AATTGGCAAA TTAATGACTC ATGGCGACTT
GGAAACCCCT TTGCCGCAGG TTTTACGGGG CCAGCAGGTT TAGAACTGAG TTACCAATTA
AGCCCAAGTG TGGACTTTGG TTTTGGTGCA TCGAAGCGAA CTCAAAGATT TTTACTTGAG
GATGATGACA CGACTGTCGA AGTGGATGAG TGGGTCAGTT TTTTACGGGC TGGCTGGCGA
GTGTCAGAAT CTGTGACGTT AACAGGTTAC GCTGGGTATT ACTTTAATGG TGAGTTGGAG
CTGAATAAGC CGCAGGTGGA GGTTGAGACC ATTGATTCTC AAGGCGCACT GGCTATTGCT
GCTGAATATA GATTTTAA
 
Protein sequence
MINGSINICL KRAIVVSLLS SVVYLPSVSA SGKPSFSPFS VSVSRIDTAE ADIGEGQNTL 
QRSSWLFDAN AKLPLNKQWS LGFNLGYGDL NYDWKQDGSS ILNRQLQGWQ QVHRYSAGVS
LSYRLNKHWM FMVAPKLQYA YADTAKSSNA SSYGVVASGM YRFGNGNLLG LGVAYLNDIS
EVRTVPFLAV NWQINDSWRL GNPFAAGFTG PAGLELSYQL SPSVDFGFGA SKRTQRFLLE
DDDTTVEVDE WVSFLRAGWR VSESVTLTGY AGYYFNGELE LNKPQVEVET IDSQGALAIA
AEYRF