Gene Swoo_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1517 
Symbol 
ID6115756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1893830 
End bp1894246 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content43% 
IMG OID641633001 
ProductDoxX family protein 
Protein accessionYP_001759900 
Protein GI170725874 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.29276e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00151008 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGGTCG ATGATATGAA AGATAAGATA GCCTTAAACG CTGCGTTATT AACGAGTGGT 
AGAGTGTTAC TGGCGCTCTA CTTTTTGTTA CCAGGGATTA TGAAGTTTGT CAGCTGGGAG
ATGCATATCA CCTTGATGGC CAAGCATAAT ATGGTGATGA TCCCACAGCT GTTAGCCATA
GCGGGTGTGT TTCAAATATC TGCGGCTATT GCACTGATAT TGAATCGATA TACTTTCATT
GTTTCCTTGA TGCTAGCTGG TTTGGTGTTA GTCATTAATG TGTCTTTGCA TGATTTTTGG
AACTATGGGG GAGTAGAAGC TGCTCATGAG ATGCAAAACT TCATTAAGAA CTTGGGGATC
TTTGCAGGTT TACTTGTGCT AGCGGGGCAC TCTAGGTGTG CGGCTCAAGC TGAGTAG
 
Protein sequence
MRVDDMKDKI ALNAALLTSG RVLLALYFLL PGIMKFVSWE MHITLMAKHN MVMIPQLLAI 
AGVFQISAAI ALILNRYTFI VSLMLAGLVL VINVSLHDFW NYGGVEAAHE MQNFIKNLGI
FAGLLVLAGH SRCAAQAE