| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1512 |
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| Symbol | |
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| ID | 6115751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1885177 |
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| End bp | 1889619 |
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| Gene Length | 4443 bp |
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| Protein Length | 1480 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632996 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001759895 |
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| Protein GI | 170725869 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0878697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA TCTCGGCCAA GCAAGTTAAT CTCAGTAAAA AAAAATATCA CTCACTCAGT
TTGAGTTTTA CCTTGTGGTT CCTCGCGCTT TCGCTTATTC CGCTGATTGG TGTCTCTTGG
TTTAGTTATG AGCAAGCTAA ACAGAGTTTG ATGAACGCAG CAGAAGATGA GTTAACTCAA
TCATCGAGTT TTACGACTCA GGCTATTCAA AGTTGGTTTA ATTTACGCCT GCAGGATTTA
AAAGTGGAAG CAGAATCGAC ACAGATGTCA GCAATGCTGC AGTCTTTGAG CTCTGGAGTA
GTCTTGAGTG AGCAACCACT TGCTCACTAT GTCAAGAGCA GTGATTGGCA AGGGAGGGTG
GATAGGTACC AAGAGCATCT TGTCACTTTA GTTGAACAGT ATGACTATAT TAATGATATC
TATCTTATCG ATACTGATGG AAACATACTC TATTCCGTTG AAAAGAATGC TGATCTTGGT
GAAAATATTT TTAGTCCTGC ACTTAGATAT AGCCATTTCT CAGCCAGTGC TCAGGACTCG
CTAAACACGG GAGAAGTGAG CTTTTCCAGT ATTGAGCATT ATCAGATCTC AGACAACCCC
ATCTCAAGTT TCATCACCTT ATCCATGTTT AATGAGTTTG GAAAAACTGT TGGTATATTT
GCAATTCAAC TGCAGTTTGA ACGCATTCTG AAATCTTTGA ACTTATCGGT AAAGGAGGGC
AGTTCGTTAA CTCATTACCT TGTTGATGAA AATGGTTTGC TGCTTTCACC TATTCGAGAT
AACTGGAATG AGGTCACCAT CAAGTCAATT GATACGGCGC AGTTCAAAGC TTGGTTAGCA
AATAGAGCTG AAAAATCATC AGCTGTTGTT TCTGAGTCAG ATGAGAAATT TAACATCAAC
CTGTCTGCAT TTGAGTACAT GGGGCCTGAT AATAAATTGG TGATAGGGTT ACACCAGGTG
GTGAAGCTAG CCAATGTTGA TTGGCTACTG GTCAGCGAAG TGGATAGAGA TGAGGCATTA
GGAGAGATTA GCTGGCTTGC AAAAATGACC TTACTAATGC TCTTATTAAC AACCTTTGTT
GTTGTGTTAT CAGCTATTTT TGTTGCTAGA AAGATAACTG AGCCCATTAA GCAGTTAGCT
AGAACTAGCC TTGATGTTGC TAAAGGTGGA CGTGTTAAGC CTATTCATAT TGATAATAAT
AATGAGATCT CTCATTTGGT TGATGCATTC AACGAGATGT TACTGACAAA AAGCTCCTAT
GAGGACTCAC TCTTTTTGGC TAACTCTCAA GCCCAAGCAG CATTAAATAA TCTAGAAGAT
CAAAAATTTG CTTTAGACCA GCATGCAATT GTTGCAGTGA CAGATCTGAA AGGAAATATT
ACCTATATTA ATCGTCGCTT CTCTGAGATA AGCGGTTACC AAGAGGAGGA GTTGATCGGA
AAAAATCATC GCCTGCTGAA CTCTGGGCGT CATCCAAGAT CGTTTTTTAT CCAGATGTAC
AGTGTGATCT CTAAAGGAGA GGTTTGGAAT GCAGAGATCT GTAATCGGGC TAAGGATGGG
AGTTACTATT GGGTAGATAC CACCATAGTG CCATTTACCA ATGCTGAAGG TAAACCTGAA
AGCTATATCG CTATTCGCAC CGATATTACC ACCAGAAAGC TTGCAGAGAT AAAAACAAAA
GAAGCCCTCT CTTTAATGCA CTCCATGCTT GAATCAACTG ATAACGGTAT TTTAGTGACA
AGTTTGGACG GTAAAATTTT ACAGTTTAAT GAAAGCTATG CTGCACTATG GGATATCGAA
GTGAAAACGG GGTTGGATCA TAGAGAGTTT GAGCTTAAAA ATAGGGACAA AATTTTAGAC
TATCAAGGGG TTATTGAGAG GATTGCAAGC CTTTATAGTG AACCCGACTT TGAAGGTTTC
GATATCTTAG AACTAACTGA TGGCAGAATA TATGAGCGTG TTTCTTTGCC TATGAAATCT
GATGAGGGGC TGTTGGGGAG GGTTTGGAGT TTCCATGATA TCAGTAAGCG AATGAAAACC
CAGAATGAGC TCATTTTGGC TAAAGAGGAG GCAGATCTTG CTGTTAAAGC AAAGAGTGAA
TTTTTAGCCA GTATGAGTCA TGAAATTCGC ACTCCCATGA ATGGTGTATT GGGGATGCTA
GGCTTACTCA ATAATACCCA GTTAACAGAC TACCAAAAGC GTAGGGTCAG TATTGCTCAG
TCCAGTGCAA AATCTCTTTT GACTTTAATC AACGATATTC TTGATTATTC GAAAATTGAT
GCTGGTAAAT TAGAGTTGGA AAATTTGGAC TTTAACTTGC GAGGAATGCT TGGTGAGTTT
GCTGAAGGGA TGGCCTTTCA GGCACAGAAT AAGAGTCTGG AGTTGGTATT AGACCTTAAA
GGGATAGAAC ACTCTATGGT GACGGGGGAT CCTAGCCGGC TTCGTCAAGC ACTGACAAAT
CTCGTGGGCA ATGCGATAAA ATTCACCAGT AAAGGTGAGG TGCTGATTGA AGCTGGACTT
CGTGATAGCG GTGACGAATG GTGTTTTTGG TGTGTGATTA CAGACACTGG AATAGGGATT
GCTGCTGATA AGATCTCATC TCTTTTTGAC TCCTTTAGTC AGGTTGATGC ATCGACTACC
CGTAAATATG GTGGTACAGG TTTAGGTTTA GCCATTGTGC AAAAAATCTG TCAGTTAATG
GGAGGAGATG TCAGCATAAC CAGTGAAGTC GGCAAAGGGA CACGTGTTGA GTTTACTATT
TACTTAGGTA AAAGTATTAA CTCTCAATTG GTTGTTCCTA GTGCGAATAT TGAAGAGTTG
AACTTACTCG TTGTTGACGA TAATGAAACC AACAGAGACG TTATTATCGA GCAGCTATTG
ATTTGGGGGG CAAATGTTGA AGGTGCATCT AATGCAGTTA AAGCGTTAGA GCTTTGTGCT
TATAGAGATG AAAACCTTGA GCAATCCCAG TTTGATGTCG CATTTCTAGA TATGCAGATG
GCAGATATTG ATGGGGCTGA GTTGGGGCGG CGGTTAAAAT TTGATGACAG ATTCAAATCA
ATAAAACTAG TGATGATGAC CTCAATGTCT CAAATCGGTG ATGCGAAATT TTTTGCCGAT
CTCGGTTTTA GTGCTTATTT TCCTAAGCCC ACAACCACCT CTGATCTTTT TGATGCACTC
TCAGTTATCT CCGAAGATGG TGAGGCTTTA CTCAAGGCGC ACCCGTTGAT CACACATCAC
TATCTGCAGA CATTAGTCCA TAACGATGAT ACCGGGCCTC AGGAGTTTTC CTCAAAAGTA
CGAATCTTAC TGGTAGAAGA TAATTATGTT AACCAGCTTG TTGCAACAGG GGTTTTAGAA
GATTTTAAGG TGTCAGTAGA TGTTGCAGAC AATGGAGTTC AAGCTATTCA TATGCTGCTT
AATGCAGAGG ATCCTCCATA CTCTTTAGTT CTGATGGATT GCCAAATGCC AGAAATGGAT
GGCTATGAAG CGTCGAGAGC AATACGCAGG GGAGAAGCGG GTGACAGGTA TAAACAGATC
CCCATTATTG CGATGACGGC GAATGCCATG ATGGGAGATA AAGAGAAATG CCTCGATTCG
GGTATGGATG ACTATTTGGC AAAGCCGATA GAGCCAGAGA AGATCTACTT TAAATTAAAC
CAATGGCTTA ACACTACAGG TGAACACAAT AGCCCAGCCT TAGAGGCGAA AACCACTTCA
AGCTCCCGTG GAGCTGGGCA TCTGAGAACC CCAGCTAAGA AAGAGTCAAA TACTGCTCAT
GATACTCAAT CGGCTTCTAT AATTGATAAT AAGATGACAG AAAGAAATAG ATTATGGGAC
AGGGATGGAC TGATGAAGCG TGCTATGGGC AAGGAGGCGC TTTTTAACTC GATACTTCAT
CTGTTTAATG AAGATATGCC TTCTAGAATG GAGGCGCTTA ATCATGCCAT TAAGGCTGAA
GATTTAGATG CGATAAGACA GGTTTCGCAT ACTGTGAAAG GTGTTGCCGC TAATGTTGGA
GGGGAGCTTC TTAAAGAGCA AGCCGCGATT ATTGAATTTG CCGCAAAAGA GGGGGATCTA
ACTAAGGCAA AAACTGAGCA TCCAGCGCTT GTGGTTGCGT ACCAAGAGTT AAAGCTGGTG
ATCGATGAAT TTCAGCAAAA GCCTGAAACA GAGGTCATTA AAAAAGAGTT GTTATCTCAG
GAGCGGGTTA ATGGGCTCTT AGATCAGCTT GATAAACTGT TGGCGCAAGG GAGTTATATC
AATATTGAGG AGTTCATAGG GCTTGAGAGT GCGAGTATCG ATAAAATTTT ACAGTCTGAA
TTTGATCACC TTCTATTACT GCTAACTGAT TATGATTACC CTGCCGCAAT TACCGCCCTT
AAAGAGTTAA AAGTTCGATT GGCTAAAATC GAACTCAGCA GAGGGGAGGC CTCTCGTTCA
TGA
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| Protein sequence | MDEISAKQVN LSKKKYHSLS LSFTLWFLAL SLIPLIGVSW FSYEQAKQSL MNAAEDELTQ
SSSFTTQAIQ SWFNLRLQDL KVEAESTQMS AMLQSLSSGV VLSEQPLAHY VKSSDWQGRV
DRYQEHLVTL VEQYDYINDI YLIDTDGNIL YSVEKNADLG ENIFSPALRY SHFSASAQDS
LNTGEVSFSS IEHYQISDNP ISSFITLSMF NEFGKTVGIF AIQLQFERIL KSLNLSVKEG
SSLTHYLVDE NGLLLSPIRD NWNEVTIKSI DTAQFKAWLA NRAEKSSAVV SESDEKFNIN
LSAFEYMGPD NKLVIGLHQV VKLANVDWLL VSEVDRDEAL GEISWLAKMT LLMLLLTTFV
VVLSAIFVAR KITEPIKQLA RTSLDVAKGG RVKPIHIDNN NEISHLVDAF NEMLLTKSSY
EDSLFLANSQ AQAALNNLED QKFALDQHAI VAVTDLKGNI TYINRRFSEI SGYQEEELIG
KNHRLLNSGR HPRSFFIQMY SVISKGEVWN AEICNRAKDG SYYWVDTTIV PFTNAEGKPE
SYIAIRTDIT TRKLAEIKTK EALSLMHSML ESTDNGILVT SLDGKILQFN ESYAALWDIE
VKTGLDHREF ELKNRDKILD YQGVIERIAS LYSEPDFEGF DILELTDGRI YERVSLPMKS
DEGLLGRVWS FHDISKRMKT QNELILAKEE ADLAVKAKSE FLASMSHEIR TPMNGVLGML
GLLNNTQLTD YQKRRVSIAQ SSAKSLLTLI NDILDYSKID AGKLELENLD FNLRGMLGEF
AEGMAFQAQN KSLELVLDLK GIEHSMVTGD PSRLRQALTN LVGNAIKFTS KGEVLIEAGL
RDSGDEWCFW CVITDTGIGI AADKISSLFD SFSQVDASTT RKYGGTGLGL AIVQKICQLM
GGDVSITSEV GKGTRVEFTI YLGKSINSQL VVPSANIEEL NLLVVDDNET NRDVIIEQLL
IWGANVEGAS NAVKALELCA YRDENLEQSQ FDVAFLDMQM ADIDGAELGR RLKFDDRFKS
IKLVMMTSMS QIGDAKFFAD LGFSAYFPKP TTTSDLFDAL SVISEDGEAL LKAHPLITHH
YLQTLVHNDD TGPQEFSSKV RILLVEDNYV NQLVATGVLE DFKVSVDVAD NGVQAIHMLL
NAEDPPYSLV LMDCQMPEMD GYEASRAIRR GEAGDRYKQI PIIAMTANAM MGDKEKCLDS
GMDDYLAKPI EPEKIYFKLN QWLNTTGEHN SPALEAKTTS SSRGAGHLRT PAKKESNTAH
DTQSASIIDN KMTERNRLWD RDGLMKRAMG KEALFNSILH LFNEDMPSRM EALNHAIKAE
DLDAIRQVSH TVKGVAANVG GELLKEQAAI IEFAAKEGDL TKAKTEHPAL VVAYQELKLV
IDEFQQKPET EVIKKELLSQ ERVNGLLDQL DKLLAQGSYI NIEEFIGLES ASIDKILQSE
FDHLLLLLTD YDYPAAITAL KELKVRLAKI ELSRGEASRS
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