Gene Swoo_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1504 
SymbolfadE 
ID6115743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1875448 
End bp1877685 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content46% 
IMG OID641632988 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001759887 
Protein GI170725861 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.786071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAA GAACAAGATT AAAAAAAGTA TTGCCTACAA TTTCTACCAC TGAACAAGAA 
GCACTCGACG CCGGCGATGT ATGGCTGGAA GGTTCGATTT ACCAAGGCGT TCCTGACTTT
AATGCCTTAA AAAATATTCC TGTAGCAAAG CTCTCTGTTG ATGAACAAGC GTTTCTTGAT
GGTCCAGTGG CAACACTGTT GGAGATGGTC GATAACTTTG CCATTCAAGG TGCTAAGCAC
ATCCCTGATG ATGTACTGAC ATTTCTCAAA ACGAACAAAT TCTTCTCACT CATCATCCCC
AAAGCTTATG GCGGACTAGA GTTTAGCCCC TATGCCAACT CAACAATTGT GGCAACAATA
GCCGCTAAAA GTTCAGCTGT AGCCGTCACC GTCATGGTGC CAAACTCACT AGGTCCAGGT
GAACTCTTAA TGCATTACGG CACCGATGAG CAGCGAGATT TCTGGTTGCC TCGCTTAGCC
AATGGTTTAG AGATCCCCTG CTTTGCTTTA ACTAGCCCTG AAGCGGGCTC TGATGCTGGT
GGGATCCCCG ATATCGGTAC CGTCACCTTT GGTGAATATG AAGGAAACCA AGTGCTTGGT
CTGTCTGTCA CTTGGGATAA ACGCTATATC ACCTTGGCGC CTATCGCCTC AGTACTTGGA
CTGGCATTTA AAGTTCAAGA TCCTAAAGGC CTACTAGGGG GAGATGAAGA TCTGGGGATC
ACCTGCGCCC TTATTCCTAA AGCTCATCCA GGTGTTCAGT TGGGTAATCG TCACGATCCC
ATGGGCGTTA ACTTCTATAA CGGTACAACC CGAGGAGAAG ATGTCTTTAT CCCTATGGAG
TTCATCATAG GTGGACAGAA AAATATTGGC CGTGGTTGGG CCATGTTGGT GGCTTGTCTT
GGCGCAGGAC GCGGGATCTC ACTGCCAGCT TTAGGTGCTT CTGTCAGCCA ATGCTCATTC
AAATCTTCAG CTGAATACGC CGCGGTTCGT GAGCAGTTTG GTTTGTCCAT CGGCAAATTT
GAAGGTATTC AGGAAAAACT CGCCGACATT GCAGGTAAAA CCTATCTGCA AGAATCAATG
CGAGTACTCA CAACCGAAGG ACTGGGTATT GGCCTTAAAC CTTCTGTTGT CACCGCTATC
GCGAAATACC ATATGACAGA GCTTGGCCGT GACATTCTAA ACTCAGCTAT GGACATTCAA
GCTGGTAAAG CGATTCAACG CGGACCACAA AACACACTCG CATCAGGCTA TGTGGCACAA
CCTATCGCAA TAACGGTAGA GGGCGCCAAC ATACTTACCC GTAACCTGAT GATCTTTGGC
CAAGGCGTAA TGCGCTGTCA TCCATATCTA CAAAGCATGG TTGAAGCGAT CCACAGCGAT
GACACTAATG CAGATAAAGT GTTTAACAGC ATCTTTGCGA AAACTGTCGG CTATAGCGTT
AATAACTCAC TGCGTGCATT CCGATTAGGT CTGCTACCTT TTACGGCTCA AGCAACCTCG
ACTCTGCCAG AGGTGATCCC ATACGAGAAG TCGGTCAATA AACTTGCCTC AAAACTTGCG
GTGTATGCTG ACTTCTCACT TTTAGTCTTG GGCGGTAAGC TCAAACAAGC CGAGATGCTC
TCGGCTCGCC TAGGTGACGT AATGAGTTAT CTATATGCAG CCATGGCATC AATTCGTTAT
TACGAACAAA AGCTGCCAAA GGAGCAAAGA GAGCAAGCCG CTCCCTACTT CCATTACGCA
ACTCGTTGGT CACTGTGCAA AGCGGAAGAG GCACTACTGG CTTTCCTTGA AAACTTCCCC
TCATCAGCAA CTCGTAAACT GATGCGTCTA CTGACAGTCA CCTACTCGGC TAAAATGCCA
AAAGTCAATG ATGACCTAGT CAGAGAACTT GCTGAGCAAG CTCAGCTAAA CACTGAGTTT
AAGCGTAACT TAACCCATCT CATTAAACCT ATCCCTGGGG ATGGTAACGA CATAAACGAG
CAAGCTTATC TTGCAAAAAT GGACTGTTTA CCGCTACTTG CCAAAGTGAA AAAAGGCCTA
CGTAGTCGCC AGTTCAAGGC GGGAACTCGA TTCTCCATCA CCTTAGATGC GGCGTTAGAA
GCTAAAGTCA TTGAACTGTC AGAGCATAAA CTTCTACAGG ACTACAACCT TAAACGTGAG
CGAGCAATTC GTGTTGATGA GTTTGATTTT GATATGAATT TAATCACTGA AAAAGCAGAA
CTAAAAATAG CTAACTAA
 
Protein sequence
MSIRTRLKKV LPTISTTEQE ALDAGDVWLE GSIYQGVPDF NALKNIPVAK LSVDEQAFLD 
GPVATLLEMV DNFAIQGAKH IPDDVLTFLK TNKFFSLIIP KAYGGLEFSP YANSTIVATI
AAKSSAVAVT VMVPNSLGPG ELLMHYGTDE QRDFWLPRLA NGLEIPCFAL TSPEAGSDAG
GIPDIGTVTF GEYEGNQVLG LSVTWDKRYI TLAPIASVLG LAFKVQDPKG LLGGDEDLGI
TCALIPKAHP GVQLGNRHDP MGVNFYNGTT RGEDVFIPME FIIGGQKNIG RGWAMLVACL
GAGRGISLPA LGASVSQCSF KSSAEYAAVR EQFGLSIGKF EGIQEKLADI AGKTYLQESM
RVLTTEGLGI GLKPSVVTAI AKYHMTELGR DILNSAMDIQ AGKAIQRGPQ NTLASGYVAQ
PIAITVEGAN ILTRNLMIFG QGVMRCHPYL QSMVEAIHSD DTNADKVFNS IFAKTVGYSV
NNSLRAFRLG LLPFTAQATS TLPEVIPYEK SVNKLASKLA VYADFSLLVL GGKLKQAEML
SARLGDVMSY LYAAMASIRY YEQKLPKEQR EQAAPYFHYA TRWSLCKAEE ALLAFLENFP
SSATRKLMRL LTVTYSAKMP KVNDDLVREL AEQAQLNTEF KRNLTHLIKP IPGDGNDINE
QAYLAKMDCL PLLAKVKKGL RSRQFKAGTR FSITLDAALE AKVIELSEHK LLQDYNLKRE
RAIRVDEFDF DMNLITEKAE LKIAN